Danish
PDB ID:  pdb_00001izl
  • Crystal Structure of Photosystem II
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 3.7 Å
  • Deposition date: 2002-10-04
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data including_not_modeled
Oligomeric count 28
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AB (CLAStructure of CLACLA ), AC (MNStructure of MNMN ), AD (CLAStructure of CLACLA ), BB (CLAStructure of CLACLA ), BC (MNStructure of MNMN ), BD (CLAStructure of CLACLA ), CA (MNStructure of MNMN ), CB (CLAStructure of CLACLA ), CC (CLAStructure of CLACLA ), CD (CLAStructure of CLACLA ), DA (MNStructure of MNMN ), DB (CLAStructure of CLACLA ), DC (PHOStructure of PHOPHO ), DD (CLAStructure of CLACLA ), EA (MNStructure of MNMN ), EB (CLAStructure of CLACLA ), EC (CLAStructure of CLACLA ), ED (CLAStructure of CLACLA ), FA (MNStructure of MNMN ), FB (CLAStructure of CLACLA ), FC (CLAStructure of CLACLA ), FD (CLAStructure of CLACLA ), GA (CLAStructure of CLACLA ), GB (CLAStructure of CLACLA ), GC (CLAStructure of CLACLA ), GD (CLAStructure of CLACLA ), HA (CLAStructure of CLACLA ), HB (CLAStructure of CLACLA ), HC (CLAStructure of CLACLA ), HD (FEStructure of FEFE ), IA (PHOStructure of PHOPHO ), IB (CLAStructure of CLACLA ), IC (CLAStructure of CLACLA ), ID (CLAStructure of CLACLA ), JA (CLAStructure of CLACLA ), JB (CLAStructure of CLACLA ), JC (CLAStructure of CLACLA ), JD (CLAStructure of CLACLA ), KA (CLAStructure of CLACLA ), KB (CLAStructure of CLACLA ), KC (CLAStructure of CLACLA ), KD (CLAStructure of CLACLA ), LA (CLAStructure of CLACLA ), LB (CLAStructure of CLACLA ), LC (CLAStructure of CLACLA ), LD (PHOStructure of PHOPHO ), MA (CLAStructure of CLACLA ), MB (CLAStructure of CLACLA ), MC (CLAStructure of CLACLA ), MD (CLAStructure of CLACLA ), NA (CLAStructure of CLACLA ), NB (FEStructure of FEFE ), NC (CLAStructure of CLACLA ), ND (PLAStructure of PLAPLA ), OA (CLAStructure of CLACLA ), OB (CLAStructure of CLACLA ), OC (CLAStructure of CLACLA ), PA (CLAStructure of CLACLA ), PB (CLAStructure of CLACLA ), PC (CLAStructure of CLACLA ), PD (CLAStructure of CLACLA ), QA (CLAStructure of CLACLA ), QB (PHOStructure of PHOPHO ), QC (CLAStructure of CLACLA ), QD (CLAStructure of CLACLA ), RA (CLAStructure of CLACLA ), RB (CLAStructure of CLACLA ), RC (CLAStructure of CLACLA ), SA (CLAStructure of CLACLA ), SB (PLAStructure of PLAPLA ), SC (CLAStructure of CLACLA ), TA (CLAStructure of CLACLA ), TB (BCRStructure of BCRBCR ), TC (CLAStructure of CLACLA ), UA (CLAStructure of CLACLA ), UC (CLAStructure of CLACLA ), VA (CLAStructure of CLACLA ), VB (CLAStructure of CLACLA ), VC (CLAStructure of CLACLA ), WA (CLAStructure of CLACLA ), WB (BCRStructure of BCRBCR ), WC (CLAStructure of CLACLA ), XA (CLAStructure of CLACLA ), XC (CLAStructure of CLACLA ), YA (CLAStructure of CLACLA ), YB (MNStructure of MNMN ), YC (CLAStructure of CLACLA ), ZA (CLAStructure of CLACLA ), ZB (MNStructure of MNMN ), ZC (CLAStructure of CLACLA )
Each chain information

Showing all 26 chains (8 with heme). Show only chains with heme

Chain A  
auth_asym_id A
Residue indices (Uniprot) 32-344 (1-360)
Missing residues 88ALA-91LEU:241GLN-250ALA
Structural gaps Exists
Uniprot ID P51765 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 1.40 Å
Chain AA heme  
auth_asym_id 0
Residue indices (Uniprot) 2-125 (27-163)
Missing residues 13ASN-21LEU
Structural gaps Exists
Uniprot ID P0A387 ￫UniprotKB
label_asym_ids of heme RD
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.31 Å
Chain B  
auth_asym_id B
Residue indices (Uniprot) 1-478 (1-510)
Mutations (UniProt numbering)
Structural gaps Exists
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Q8DIQ1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BA heme  
auth_asym_id 1
Residue indices (Uniprot) 1-25 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme OD
Available structure PDB
Chain C  
auth_asym_id C
Residue indices (Uniprot) 48-456 (1-461)
Mutations (UniProt numbering)
Structural gaps Exists
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Q8DIF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id D
Residue indices (Uniprot) 34-352 (1-352)
Structural gaps Exists
Uniprot ID Q8CM25 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 7-41 (2-84)
Uniprot ID Q8DIP0 ￫UniprotKB
label_asym_ids of heme UB
Available structure PDB
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 13-42 (2-45)
Uniprot ID Q8DIN9 ￫UniprotKB
label_asym_ids of heme UB
Available structure PDB
Chain H  
auth_asym_id H
Residue indices (Uniprot) 1-33 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id I
Residue indices (Uniprot) 1-26 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id K
Residue indices (Uniprot) 5-31 (10-46)
Uniprot ID Q9F1K9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id O
Residue indices (Uniprot) 1-205 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id U
Residue indices (Uniprot) 1-97 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain M heme  
auth_asym_id V
Residue indices (Uniprot) 2-130 (27-163)
Uniprot ID P0A387 ￫UniprotKB
label_asym_ids of heme XB
Available structure PDB
Chain N heme  
auth_asym_id X
Residue indices (Uniprot) 1-25 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme UB
Available structure PDB
Chain O  
auth_asym_id J
Residue indices (Uniprot) 32-344 (1-360)
Missing residues 88ALA-91LEU:241GLN-250ALA
Structural gaps Exists
Uniprot ID P51765 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 1.34 Å
Chain P  
auth_asym_id L
Residue indices (Uniprot) 1-478 (1-510)
Mutations (UniProt numbering)
Structural gaps Exists
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Q8DIQ1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id M
Residue indices (Uniprot) 43-456 (1-461)
Mutations (UniProt numbering)
Structural gaps Exists
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Q8DIF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain R  
auth_asym_id N
Residue indices (Uniprot) 34-352 (1-352)
Structural gaps Exists
Uniprot ID Q8CM25 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain S heme  
auth_asym_id P
Residue indices (Uniprot) 25-41 (2-84)
Uniprot ID Q8DIP0 ￫UniprotKB
label_asym_ids of heme OD
Available structure PDB
Chain T heme  
auth_asym_id Q
Residue indices (Uniprot) 18-43 (2-45)
Uniprot ID Q8DIN9 ￫UniprotKB
label_asym_ids of heme OD
Available structure PDB
Chain V  
auth_asym_id S
Residue indices (Uniprot) 2-33 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain W  
auth_asym_id T
Residue indices (Uniprot) 2-26 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain X  
auth_asym_id W
Residue indices (Uniprot) 5-31 (10-46)
Uniprot ID Q9F1K9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Y  
auth_asym_id Y
Residue indices (Uniprot) 1-205 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain Z  
auth_asym_id Z
Residue indices (Uniprot) 6-97 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB