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PDB ID:  pdb_00001w5c
  • Photosystem II from Thermosynechococcus elongatus
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • Deposition date: 2004-08-06
Number of assemblies:  2
Assembly ID:  1  (author_and_software_defined_assembly)    
Structural data including_not_modeled
Oligomeric count 10
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (MNStructure of MNMN ), AB (CLAStructure of CLACLA ), BA (MNStructure of MNMN ), BB (CLAStructure of CLACLA ), CA (FE2Structure of FE2FE2 ), CB (CLAStructure of CLACLA ), DA (MNStructure of MNMN ), DB (CLAStructure of CLACLA ), EA (CLAStructure of CLACLA ), EB (CLAStructure of CLACLA ), FA (CLAStructure of CLACLA ), FB (CLAStructure of CLACLA ), GA (CLAStructure of CLACLA ), GB (CLAStructure of CLACLA ), HA (CLAStructure of CLACLA ), HB (CLAStructure of CLACLA ), IA (CLAStructure of CLACLA ), IB (PHOStructure of PHOPHO ), JA (CLAStructure of CLACLA ), JB (CLAStructure of CLACLA ), KA (CLAStructure of CLACLA ), KB (PL9Structure of PL9PL9 ), LA (CLAStructure of CLACLA ), MA (CLAStructure of CLACLA ), MB (BCRStructure of BCRBCR ), NA (CLAStructure of CLACLA ), OA (CLAStructure of CLACLA ), PA (CLAStructure of CLACLA ), QA (CLAStructure of CLACLA ), RA (CLAStructure of CLACLA ), SA (CLAStructure of CLACLA ), TA (CLAStructure of CLACLA ), U (CLAStructure of CLACLA ), UA (CLAStructure of CLACLA ), V (CLAStructure of CLACLA ), VA (CLAStructure of CLACLA ), W (CLAStructure of CLACLA ), WA (CLAStructure of CLACLA ), X (PHOStructure of PHOPHO ), XA (CLAStructure of CLACLA ), Y (CLAStructure of CLACLA ), YA (CLAStructure of CLACLA ), Z (MNStructure of MNMN ), ZA (CLAStructure of CLACLA )
Each chain information

Showing all 10 chains (3 with heme). Show only chains with heme

Chain A  
auth_asym_id A
Residue indices (Uniprot) 8-334 (1-360)
Structural gaps Exists
Uniprot ID P0A444 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain B  
auth_asym_id B
Residue indices (Uniprot) 16-481 (1-510)
Missing residues 56TRP-60MET:81THR-89GLY:119ASP-130GLU:181VAL-187PRO:296ALA-306PRO:321LYS-329PRO
Structural gaps Exists
Uniprot ID Q8DIQ1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.37 Å
Chain C  
auth_asym_id C
Residue indices (Uniprot) 21-456 (1-461)
Structural gaps Exists
Uniprot ID Q8DIF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id D
Residue indices (Uniprot) 1-350 (1-352)
Uniprot ID Q8CM25 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 8-84 (1-84)
Missing residues 66VAL-71GLU
Structural gaps Exists
Uniprot ID Q8DIP0 ￫UniprotKB
label_asym_ids of heme LB
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.22 Å
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 9-45 (2-45)
Uniprot ID Q8DIN9 ￫UniprotKB
label_asym_ids of heme LB
Available structure PDB
Chain M  
auth_asym_id O
Residue indices (Uniprot) 1-179 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id U
Residue indices (Uniprot) 1-100 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain R heme  
auth_asym_id V
Residue indices (Uniprot) 2-137 (1-163)
Uniprot ID P0A386 ￫UniprotKB
label_asym_ids of heme HD
Available structure PDB
Chain S  
auth_asym_id X
Residue indices (Uniprot) 2-584 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Assembly ID:  2  (author_and_software_defined_assembly)    
Structural data including_not_modeled
Oligomeric count 10
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AC (CLAStructure of CLACLA ), AD (CLAStructure of CLACLA ), BC (CLAStructure of CLACLA ), BD (PHOStructure of PHOPHO ), CC (CLAStructure of CLACLA ), CD (CLAStructure of CLACLA ), DC (CLAStructure of CLACLA ), DD (PL9Structure of PL9PL9 ), EC (CLAStructure of CLACLA ), FC (CLAStructure of CLACLA ), FD (BCRStructure of BCRBCR ), GC (CLAStructure of CLACLA ), HC (CLAStructure of CLACLA ), IC (CLAStructure of CLACLA ), JC (CLAStructure of CLACLA ), KC (CLAStructure of CLACLA ), LC (CLAStructure of CLACLA ), MC (CLAStructure of CLACLA ), NB (CLAStructure of CLACLA ), NC (CLAStructure of CLACLA ), OB (CLAStructure of CLACLA ), OC (CLAStructure of CLACLA ), PB (CLAStructure of CLACLA ), PC (CLAStructure of CLACLA ), QB (PHOStructure of PHOPHO ), QC (CLAStructure of CLACLA ), RB (CLAStructure of CLACLA ), RC (CLAStructure of CLACLA ), SB (MNStructure of MNMN ), SC (CLAStructure of CLACLA ), TB (MNStructure of MNMN ), TC (CLAStructure of CLACLA ), UB (MNStructure of MNMN ), UC (CLAStructure of CLACLA ), VB (FE2Structure of FE2FE2 ), VC (CLAStructure of CLACLA ), WB (MNStructure of MNMN ), WC (CLAStructure of CLACLA ), XB (CLAStructure of CLACLA ), XC (CLAStructure of CLACLA ), YB (CLAStructure of CLACLA ), YC (CLAStructure of CLACLA ), ZB (CLAStructure of CLACLA ), ZC (CLAStructure of CLACLA )
Each chain information

Showing all 10 chains (3 with heme). Show only chains with heme

Chain G  
auth_asym_id G
Residue indices (Uniprot) 8-334 (1-360)
Structural gaps Exists
Uniprot ID P0A444 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id H
Residue indices (Uniprot) 16-481 (1-510)
Missing residues 56TRP-60MET:81THR-89GLY:119ASP-130GLU:181VAL-187PRO:296ALA-306PRO:321LYS-329PRO
Structural gaps Exists
Uniprot ID Q8DIQ1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.35 Å
Chain I  
auth_asym_id I
Residue indices (Uniprot) 21-456 (1-461)
Structural gaps Exists
Uniprot ID Q8DIF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id J
Residue indices (Uniprot) 1-350 (1-352)
Uniprot ID Q8CM25 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K heme  
auth_asym_id K
Residue indices (Uniprot) 8-84 (1-84)
Missing residues 66VAL-71GLU
Structural gaps Exists
Uniprot ID Q8DIP0 ￫UniprotKB
label_asym_ids of heme ED
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.21 Å
Chain L heme  
auth_asym_id L
Residue indices (Uniprot) 9-45 (2-45)
Uniprot ID Q8DIN9 ￫UniprotKB
label_asym_ids of heme ED
Available structure PDB
Chain N  
auth_asym_id P
Residue indices (Uniprot) 1-179 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain O  
auth_asym_id S
Residue indices (Uniprot) 1-100 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain P heme  
auth_asym_id T
Residue indices (Uniprot) 2-137 (1-163)
Uniprot ID P0A386 ￫UniprotKB
label_asym_ids of heme GD
Available structure PDB
Chain T  
auth_asym_id Y
Residue indices (Uniprot) 2-584 (-)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB