PDB ID:  pdb_00002dys
  • Bovine heart cytochrome C oxidase modified by DCCD
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • Deposition date: 2006-09-16
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data modeled
Oligomeric count 26
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (CUStructure of CUCU ), AB (TGLStructure of TGLTGL ), AC (PEKStructure of PEKPEK ), BA (MGStructure of MGMG ), BB (DMUStructure of DMUDMU ), BC (CDLStructure of CDLCDL ), CA (NAStructure of NANA ), CB (CUStructure of CUCU ), CC (CHDStructure of CHDCHD ), DB (MGStructure of MGMG ), DC (DMUStructure of DMUDMU ), EB (NAStructure of NANA ), FA (PGVStructure of PGVPGV ), GA (PGVStructure of PGVPGV ), HA (CUAStructure of CUACUA ), HB (TGLStructure of TGLTGL ), IA (TGLStructure of TGLTGL ), IB (TGLStructure of TGLTGL ), JA (PSCStructure of PSCPSC ), JB (PGVStructure of PGVPGV ), KA (CHDStructure of CHDCHD ), KB (PGVStructure of PGVPGV ), LA (DCWStructure of DCWDCW ), LB (CUAStructure of CUACUA ), MA (DMUStructure of DMUDMU ), MB (CHDStructure of CHDCHD ), NA (UNXStructure of UNXUNX ), NB (TGLStructure of TGLTGL ), OA (CHDStructure of CHDCHD ), OB (PSCStructure of PSCPSC ), PA (PEKStructure of PEKPEK ), PB (DMUStructure of DMUDMU ), QA (PEKStructure of PEKPEK ), QB (UNXStructure of UNXUNX ), RA (PGVStructure of PGVPGV ), RB (DCWStructure of DCWDCW ), SA (PGVStructure of PGVPGV ), SB (CHDStructure of CHDCHD ), TA (CDLStructure of CDLCDL ), TB (PEKStructure of PEKPEK ), UA (CHDStructure of CHDCHD ), UB (PEKStructure of PEKPEK ), VA (TGLStructure of TGLTGL ), VB (PGVStructure of PGVPGV ), WA (ZNStructure of ZNZN ), WB (PGVStructure of PGVPGV ), XA (CDLStructure of CDLCDL ), XB (CDLStructure of CDLCDL ), YA (PEKStructure of PEKPEK ), YB (CHDStructure of CHDCHD ), ZA (CHDStructure of CHDCHD ), ZB (ZNStructure of ZNZN )
Each chain information

Showing all 26 chains (2 with heme). Show only chains with heme

Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 1-514 (1-514)
Missing residues 1MET-1MET
Nonstandard amino acids Structure of FMEFME
Uniprot ID P00396 →UniprotKB
label_asym_ids of heme EA ,  DA
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain B  
auth_asym_id B
Residue indices (Uniprot) 1-227 (1-227)
Missing residues 1MET-1MET
Nonstandard amino acids Structure of FMEFME
Uniprot ID P68530 →UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain C  
auth_asym_id C
Residue indices (Uniprot) 3-261 (1-261)
Uniprot ID P00415 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id D
Residue indices (Uniprot) 4-147 (23-169)
Uniprot ID P00423 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain E  
auth_asym_id E
Residue indices (Uniprot) 5-109 (44-152)
Uniprot ID P00426 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain F  
auth_asym_id F
Residue indices (Uniprot) 1-98 (32-129)
Uniprot ID P00428 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id G
Residue indices (Uniprot) 1-84 (13-97)
Missing residues 11THR-11THR
Nonstandard amino acids Structure of TPOTPO
Uniprot ID P07471 →UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain H  
auth_asym_id H
Residue indices (Uniprot) 7-85 (2-86)
Uniprot ID P00429 →UniprotKB
S-S bonds 29:64,39:53
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id I
Residue indices (Uniprot) 1-73 (2-74)
Missing residues 1SER-1SER
Nonstandard amino acids Structure of SACSAC
Uniprot ID P04038 →UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain J  
auth_asym_id J
Residue indices (Uniprot) 1-58 (22-80)
Uniprot ID P07470 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id K
Residue indices (Uniprot) 6-54 (25-80)
Uniprot ID P13183 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id L
Residue indices (Uniprot) 2-47 (17-63)
Uniprot ID P00430 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain M  
auth_asym_id M
Residue indices (Uniprot) 1-43 (25-70)
Uniprot ID P10175 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain N heme  
auth_asym_id N
Residue indices (Uniprot) 1-514 (1-514)
Missing residues 1MET-1MET
Nonstandard amino acids Structure of FMEFME
Uniprot ID P00396 →UniprotKB
label_asym_ids of heme GB ,  FB
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain O  
auth_asym_id O
Residue indices (Uniprot) 1-227 (1-227)
Missing residues 1MET-1MET
Nonstandard amino acids Structure of FMEFME
Uniprot ID P68530 →UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain P  
auth_asym_id P
Residue indices (Uniprot) 3-261 (1-261)
Uniprot ID P00415 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id Q
Residue indices (Uniprot) 4-147 (23-169)
Uniprot ID P00423 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain R  
auth_asym_id R
Residue indices (Uniprot) 5-109 (44-152)
Uniprot ID P00426 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id S
Residue indices (Uniprot) 1-98 (32-129)
Uniprot ID P00428 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id T
Residue indices (Uniprot) 1-84 (13-97)
Missing residues 11THR-11THR
Nonstandard amino acids Structure of TPOTPO
Uniprot ID P07471 →UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain U  
auth_asym_id U
Residue indices (Uniprot) 7-85 (2-86)
Uniprot ID P00429 →UniprotKB
S-S bonds 29:64,39:53
label_asym_ids of heme None
Available structure PDB
Chain V  
auth_asym_id V
Residue indices (Uniprot) 1-73 (2-74)
Missing residues 1SER-1SER
Nonstandard amino acids Structure of SACSAC
Uniprot ID P04038 →UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain W  
auth_asym_id W
Residue indices (Uniprot) 1-58 (22-80)
Uniprot ID P07470 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain X  
auth_asym_id X
Residue indices (Uniprot) 6-54 (25-80)
Uniprot ID P13183 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Y  
auth_asym_id Y
Residue indices (Uniprot) 2-47 (17-63)
Uniprot ID P00430 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Z  
auth_asym_id Z
Residue indices (Uniprot) 1-43 (25-70)
Uniprot ID P10175 →UniprotKB
label_asym_ids of heme None
Available structure PDB