Danish
PDB ID:  pdb_00002gc4
  • Structural comparison of the oxidized ternary electron transfer complex of methylamine dehydrogenase, amicyanin and cytochrome c551i from Paracoccus denitrificans with the substrate-reduced, copper free complex at 1.9 A resolution.
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • Deposition date: 2006-03-13
Number of assemblies:  4
Assembly ID:  1  (author_defined_assembly)    
Structural data modeled
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others Q (CUStructure of CUCU ), R (NAStructure of NANA )
Each chain information

Showing all 4 chains (1 with heme). Show only chains with heme

Chain A  
auth_asym_id A
Residue indices (Uniprot) 5-386 (32-417)
Mutations (UniProt numbering)
Uniprot ID P29894 ￫UniprotKB
S-S bonds 181:196
label_asym_ids of heme None
Available structure PDB
Chain B  
auth_asym_id B
Residue indices (Uniprot) 7-131 (58-188)
Missing residues 57TRP-57TRP
Nonstandard amino acids Structure of TRQTRQ
Uniprot ID P22619 ￫UniprotKB
S-S bonds 23:88,29:61,36:121,38:86,46:77,78:109
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain C  
auth_asym_id C
Residue indices (Uniprot) 1-105 (27-131)
Uniprot ID P22364 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 1-147 (23-169)
Uniprot ID P29899 ￫UniprotKB
label_asym_ids of heme S
Available structure PDB
Assembly ID:  2  (author_defined_assembly)    
Structural data modeled
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others T (CUStructure of CUCU ), U (NAStructure of NANA )
Each chain information

Showing all 4 chains (1 with heme). Show only chains with heme

Chain E  
auth_asym_id E
Residue indices (Uniprot) 5-386 (32-417)
Mutations (UniProt numbering)
Uniprot ID P29894 ￫UniprotKB
S-S bonds 181:196
label_asym_ids of heme None
Available structure PDB
Chain F  
auth_asym_id F
Residue indices (Uniprot) 7-131 (58-188)
Missing residues 57TRP-57TRP
Nonstandard amino acids Structure of TRQTRQ
Uniprot ID P22619 ￫UniprotKB
S-S bonds 23:88,29:61,36:121,38:86,46:77,78:109
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain G  
auth_asym_id G
Residue indices (Uniprot) 1-105 (27-131)
Uniprot ID P22364 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H heme  
auth_asym_id H
Residue indices (Uniprot) 1-147 (23-169)
Uniprot ID P29899 ￫UniprotKB
label_asym_ids of heme V
Available structure PDB
Assembly ID:  3  (author_defined_assembly)    
Structural data modeled
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others W (CUStructure of CUCU ), X (NAStructure of NANA )
Each chain information

Showing all 4 chains (1 with heme). Show only chains with heme

Chain I  
auth_asym_id I
Residue indices (Uniprot) 5-386 (32-417)
Mutations (UniProt numbering)
Uniprot ID P29894 ￫UniprotKB
S-S bonds 181:196
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id J
Residue indices (Uniprot) 7-131 (58-188)
Missing residues 57TRP-57TRP
Nonstandard amino acids Structure of TRQTRQ
Uniprot ID P22619 ￫UniprotKB
S-S bonds 23:88,29:61,36:121,38:86,46:77,78:109
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain K  
auth_asym_id K
Residue indices (Uniprot) 1-105 (27-131)
Uniprot ID P22364 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain L heme  
auth_asym_id L
Residue indices (Uniprot) 1-147 (23-169)
Uniprot ID P29899 ￫UniprotKB
label_asym_ids of heme Y
Available structure PDB
Assembly ID:  4  (author_defined_assembly)    
Structural data modeled
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (NAStructure of NANA ), Z (CUStructure of CUCU )
Each chain information

Showing all 4 chains (1 with heme). Show only chains with heme

Chain M  
auth_asym_id M
Residue indices (Uniprot) 5-386 (32-417)
Mutations (UniProt numbering)
Uniprot ID P29894 ￫UniprotKB
S-S bonds 181:196
label_asym_ids of heme None
Available structure PDB
Chain N  
auth_asym_id N
Residue indices (Uniprot) 7-131 (58-188)
Missing residues 57TRP-57TRP
Nonstandard amino acids Structure of TRQTRQ
Uniprot ID P22619 ￫UniprotKB
S-S bonds 23:88,29:61,36:121,38:86,46:77,78:109
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.14 Å
Chain O  
auth_asym_id O
Residue indices (Uniprot) 1-105 (27-131)
Uniprot ID P22364 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain P heme  
auth_asym_id P
Residue indices (Uniprot) 1-147 (23-169)
Uniprot ID P29899 ￫UniprotKB
label_asym_ids of heme BA
Available structure PDB