PDB ID:  pdb_00002nw8
  • Crystal Structure of Tryptophan 2,3-dioxygenase (TDO) from Xanthomonas campestris in complex with ferrous heme and tryptophan. Northeast Structural Genomics Target XcR13.
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • Deposition date: 2006-11-14
Number of assemblies:  1
Assembly ID:  1  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others C (TRPStructure of TRPTRP ), C-1 (TRPStructure of TRPTRP ), D (TRPStructure of TRPTRP ), D-1 (TRPStructure of TRPTRP ), F (MNStructure of MNMN ), F-1 (MNStructure of MNMN ), G (MNStructure of MNMN ), G-1 (MNStructure of MNMN ), H (TRPStructure of TRPTRP ), H-1 (TRPStructure of TRPTRP ), I (TRPStructure of TRPTRP ), I-1 (TRPStructure of TRPTRP )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 19-284 (1-298)
Uniprot ID Q8PDA8 →UniprotKB
label_asym_ids of heme E
Available structure PDB
Chain A-1 heme  
auth_asym_id A
Residue indices (Uniprot) 19-284 (1-298)
Uniprot ID Q8PDA8 →UniprotKB
label_asym_ids of heme E-1
Available structure PDB
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 21-290 (1-298)
Missing residues 251LYS-256GLY
Structural gaps Exists
Uniprot ID Q8PDA8 →UniprotKB
label_asym_ids of heme J
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain B-1 heme  
auth_asym_id B
Residue indices (Uniprot) 21-290 (1-298)
Missing residues 251LYS-256GLY
Structural gaps Exists
Uniprot ID Q8PDA8 →UniprotKB
label_asym_ids of heme J-1
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å