Danish
PDB ID:  pdb_00003bk9
  • H55A mutant of tryptophan 2,3-dioxygenase from Xanthomonas campestris
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • Deposition date: 2007-12-06
Number of assemblies:  2
Assembly ID:  1  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others I (TRPStructure of TRPTRP ), K (TRPStructure of TRPTRP ), L (TRPStructure of TRPTRP ), N (TRPStructure of TRPTRP ), O (TRPStructure of TRPTRP ), P (TRPStructure of TRPTRP ), R (TRPStructure of TRPTRP ), S (TRPStructure of TRPTRP )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 7-283 (1-298)
Mutations (UniProt numbering)
Uniprot ID Q8PDA8 ￫UniprotKB
label_asym_ids of heme J
Available structure PDB
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 7-286 (1-298)
Mutations (UniProt numbering)
Uniprot ID Q8PDA8 ￫UniprotKB
label_asym_ids of heme M
Available structure PDB
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 7-282 (1-298)
Mutations (UniProt numbering)
Missing residues 187TYR-190ARG
Structural gaps Exists
Uniprot ID Q8PDA8 ￫UniprotKB
label_asym_ids of heme Q
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.15 Å
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 22-283 (1-298)
Mutations (UniProt numbering)
Uniprot ID Q8PDA8 ￫UniprotKB
label_asym_ids of heme T
Available structure PDB
Assembly ID:  2  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others BA (TRPStructure of TRPTRP ), U (TRPStructure of TRPTRP ), W (TRPStructure of TRPTRP ), X (TRPStructure of TRPTRP ), Z (TRPStructure of TRPTRP )
Each chain information
Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 23-282 (1-298)
Mutations (UniProt numbering)
Uniprot ID Q8PDA8 ￫UniprotKB
label_asym_ids of heme V
Available structure PDB
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 23-283 (1-298)
Mutations (UniProt numbering)
Missing residues 188GLN-198ALA
Structural gaps Exists
Uniprot ID Q8PDA8 ￫UniprotKB
label_asym_ids of heme Y
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 1.21 Å
Chain G heme  
auth_asym_id G
Residue indices (Uniprot) 21-282 (1-298)
Mutations (UniProt numbering)
Uniprot ID Q8PDA8 ￫UniprotKB
label_asym_ids of heme AA
Available structure PDB
Chain H heme  
auth_asym_id H
Residue indices (Uniprot) 22-283 (1-298)
Mutations (UniProt numbering)
Missing residues 187TYR-191ASP
Structural gaps Exists
Uniprot ID Q8PDA8 ￫UniprotKB
label_asym_ids of heme CA
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.22 Å