PDB ID:  pdb_00003d38
  • Crystal structure of new trigonal form of photosynthetic reaction center from Blastochloris viridis. Crystals grown in microfluidics by detergent capture.
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 3.21 Å
  • Deposition date: 2008-05-09
Number of assemblies:  1
Assembly ID:  0  (software_defined_assembly)    
Structural data modeled
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (BPBStructure of BPBBPB ), BA (UQ1Structure of UQ1UQ1 ), CA (UQ1Structure of UQ1UQ1 ), DA (LDAStructure of LDALDA ), E (SO4Structure of SO4SO4 ), EA (FE2Structure of FE2FE2 ), F (SO4Structure of SO4SO4 ), FA (SO4Structure of SO4SO4 ), G (SO4Structure of SO4SO4 ), GA (SO4Structure of SO4SO4 ), H (SO4Structure of SO4SO4 ), HA (SO4Structure of SO4SO4 ), I (SO4Structure of SO4SO4 ), IA (SO4Structure of SO4SO4 ), J (SO4Structure of SO4SO4 ), JA (MQ9Structure of MQ9MQ9 ), K (SO4Structure of SO4SO4 ), KA (BCBStructure of BCBBCB ), LA (BCBStructure of BCBBCB ), MA (BPBStructure of BPBBPB ), NA (NS5Structure of NS5NS5 ), OA (LDAStructure of LDALDA ), P (HTOStructure of HTOHTO ), Q (HTOStructure of HTOHTO ), R (SO4Structure of SO4SO4 ), S (SO4Structure of SO4SO4 ), T (SO4Structure of SO4SO4 ), U (SO4Structure of SO4SO4 ), V (LDAStructure of LDALDA ), W (LDAStructure of LDALDA ), X (HTOStructure of HTOHTO ), Y (BCBStructure of BCBBCB ), Z (BCBStructure of BCBBCB )
Each chain information

Showing all 4 chains (1 with heme). Show only chains with heme

Chain A heme  
auth_asym_id C
Residue indices (Uniprot) 1-332 (21-356)
Uniprot ID P07173 →UniprotKB
label_asym_ids of heme O ,  N ,  M ,  L
Available structure PDB
Chain B  
auth_asym_id H
Residue indices (Uniprot) 1-258 (1-258)
Missing residues 1MET-1MET:46PRO-53ALA
Structural gaps Exists
Nonstandard amino acids Structure of FMEFME
Uniprot ID P06008 →UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain C  
auth_asym_id L
Residue indices (Uniprot) 1-273 (2-274)
Uniprot ID P06009 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id M
Residue indices (Uniprot) 1-323 (2-324)
Uniprot ID P06010 →UniprotKB
label_asym_ids of heme None
Available structure PDB