PDB ID:  pdb_00003fo3
  • Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase reduced by sodium dithionite (sulfite complex)
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • Deposition date: 2008-12-27
Number of assemblies:  1
Assembly ID:  1  (author_and_software_defined_assembly)    
Structural data PDB
Oligomeric count 6
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (PG6Structure of PG6PG6 ), AA-1 (PG6Structure of PG6PG6 ), AA-2 (PG6Structure of PG6PG6 ), AB (PG4Structure of PG4PG4 ), AB-1 (PG4Structure of PG4PG4 ), AB-2 (PG4Structure of PG4PG4 ), BA (PG6Structure of PG6PG6 ), BA-1 (PG6Structure of PG6PG6 ), BA-2 (PG6Structure of PG6PG6 ), BB (PG6Structure of PG6PG6 ), BB-1 (PG6Structure of PG6PG6 ), BB-2 (PG6Structure of PG6PG6 ), CA (NAStructure of NANA ), CA-1 (NAStructure of NANA ), CA-2 (NAStructure of NANA ), CB (PG4Structure of PG4PG4 ), CB-1 (PG4Structure of PG4PG4 ), CB-2 (PG4Structure of PG4PG4 ), DB (PG4Structure of PG4PG4 ), DB-1 (PG4Structure of PG4PG4 ), DB-2 (PG4Structure of PG4PG4 ), EB (PG4Structure of PG4PG4 ), EB-1 (PG4Structure of PG4PG4 ), EB-2 (PG4Structure of PG4PG4 ), FB (ACTStructure of ACTACT ), FB-1 (ACTStructure of ACTACT ), FB-2 (ACTStructure of ACTACT ), GB (PG4Structure of PG4PG4 ), GB-1 (PG4Structure of PG4PG4 ), GB-2 (PG4Structure of PG4PG4 ), HB (NAStructure of NANA ), HB-1 (NAStructure of NANA ), HB-2 (NAStructure of NANA ), IB (NAStructure of NANA ), IB-1 (NAStructure of NANA ), IB-2 (NAStructure of NANA ), K (SO3Structure of SO3SO3 ), K-1 (SO3Structure of SO3SO3 ), K-2 (SO3Structure of SO3SO3 ), L (CAStructure of CACA ), L-1 (CAStructure of CACA ), L-2 (CAStructure of CACA ), LA (SO3Structure of SO3SO3 ), LA-1 (SO3Structure of SO3SO3 ), LA-2 (SO3Structure of SO3SO3 ), M (CAStructure of CACA ), M-1 (CAStructure of CACA ), M-2 (CAStructure of CACA ), MA (CAStructure of CACA ), MA-1 (CAStructure of CACA ), MA-2 (CAStructure of CACA ), N (SO4Structure of SO4SO4 ), N-1 (SO4Structure of SO4SO4 ), N-2 (SO4Structure of SO4SO4 ), NA (CAStructure of CACA ), NA-1 (CAStructure of CACA ), NA-2 (CAStructure of CACA ), O (THJStructure of THJTHJ ), O-1 (THJStructure of THJTHJ ), O-2 (THJStructure of THJTHJ ), OA (SO3Structure of SO3SO3 ), OA-1 (SO3Structure of SO3SO3 ), OA-2 (SO3Structure of SO3SO3 ), P (NAStructure of NANA ), P-1 (NAStructure of NANA ), P-2 (NAStructure of NANA ), PA (THJStructure of THJTHJ ), PA-1 (THJStructure of THJTHJ ), PA-2 (THJStructure of THJTHJ ), Q (PG6Structure of PG6PG6 ), Q-1 (PG6Structure of PG6PG6 ), Q-2 (PG6Structure of PG6PG6 ), QA (NAStructure of NANA ), QA-1 (NAStructure of NANA ), QA-2 (NAStructure of NANA ), R (TRSStructure of TRSTRS ), R-1 (TRSStructure of TRSTRS ), R-2 (TRSStructure of TRSTRS ), RA (PG6Structure of PG6PG6 ), RA-1 (PG6Structure of PG6PG6 ), RA-2 (PG6Structure of PG6PG6 ), S (PG6Structure of PG6PG6 ), S-1 (PG6Structure of PG6PG6 ), S-2 (PG6Structure of PG6PG6 ), SA (TRSStructure of TRSTRS ), SA-1 (TRSStructure of TRSTRS ), SA-2 (TRSStructure of TRSTRS ), T (PG4Structure of PG4PG4 ), T-1 (PG4Structure of PG4PG4 ), T-2 (PG4Structure of PG4PG4 ), TA (SO4Structure of SO4SO4 ), TA-1 (SO4Structure of SO4SO4 ), TA-2 (SO4Structure of SO4SO4 ), U (PG6Structure of PG6PG6 ), U-1 (PG6Structure of PG6PG6 ), U-2 (PG6Structure of PG6PG6 ), UA (PG6Structure of PG6PG6 ), UA-1 (PG6Structure of PG6PG6 ), UA-2 (PG6Structure of PG6PG6 ), V (PG4Structure of PG4PG4 ), V-1 (PG4Structure of PG4PG4 ), V-2 (PG4Structure of PG4PG4 ), VA (PG4Structure of PG4PG4 ), VA-1 (PG4Structure of PG4PG4 ), VA-2 (PG4Structure of PG4PG4 ), W (PG4Structure of PG4PG4 ), W-1 (PG4Structure of PG4PG4 ), W-2 (PG4Structure of PG4PG4 ), WA (PG4Structure of PG4PG4 ), WA-1 (PG4Structure of PG4PG4 ), WA-2 (PG4Structure of PG4PG4 ), X (PG4Structure of PG4PG4 ), X-1 (PG4Structure of PG4PG4 ), X-2 (PG4Structure of PG4PG4 ), XA (PG4Structure of PG4PG4 ), XA-1 (PG4Structure of PG4PG4 ), XA-2 (PG4Structure of PG4PG4 ), Y (PG4Structure of PG4PG4 ), Y-1 (PG4Structure of PG4PG4 ), Y-2 (PG4Structure of PG4PG4 ), YA (PG4Structure of PG4PG4 ), YA-1 (PG4Structure of PG4PG4 ), YA-2 (PG4Structure of PG4PG4 ), Z (PG4Structure of PG4PG4 ), Z-1 (PG4Structure of PG4PG4 ), Z-2 (PG4Structure of PG4PG4 ), ZA (PG4Structure of PG4PG4 ), ZA-1 (PG4Structure of PG4PG4 ), ZA-2 (PG4Structure of PG4PG4 )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 5-522 (29-553)
Uniprot ID L0DSL2 →UniprotKB
label_asym_ids of heme J ,  I ,  H ,  G ,  F ,  E ,  D ,  C
Available structure PDB
Chain A-1 heme  
auth_asym_id A
Residue indices (Uniprot) 5-522 (29-553)
Uniprot ID L0DSL2 →UniprotKB
label_asym_ids of heme J-1 ,  I-1 ,  H-1 ,  G-1 ,  F-1 ,  E-1 ,  D-1 ,  C-1
Available structure PDB
Chain A-2 heme  
auth_asym_id A
Residue indices (Uniprot) 5-522 (29-553)
Uniprot ID L0DSL2 →UniprotKB
label_asym_ids of heme J-2 ,  I-2 ,  H-2 ,  G-2 ,  F-2 ,  E-2 ,  D-2 ,  C-2
Available structure PDB
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 5-522 (29-553)
Uniprot ID L0DSL2 →UniprotKB
label_asym_ids of heme KA ,  JA ,  IA ,  HA ,  GA ,  FA ,  EA ,  DA
Available structure PDB
Chain B-1 heme  
auth_asym_id B
Residue indices (Uniprot) 5-522 (29-553)
Uniprot ID L0DSL2 →UniprotKB
label_asym_ids of heme KA-1 ,  JA-1 ,  IA-1 ,  HA-1 ,  GA-1 ,  FA-1 ,  EA-1 ,  DA-1
Available structure PDB
Chain B-2 heme  
auth_asym_id B
Residue indices (Uniprot) 5-522 (29-553)
Uniprot ID L0DSL2 →UniprotKB
label_asym_ids of heme KA-2 ,  JA-2 ,  IA-2 ,  HA-2 ,  GA-2 ,  FA-2 ,  EA-2 ,  DA-2
Available structure PDB