PDB ID:  pdb_00003gas
  • Crystal Structure of Helicobacter pylori Heme Oxygenase Hugz in Complex with Heme
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • Deposition date: 2009-02-18
Number of assemblies:  3
Assembly ID:  1  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 2
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others H (AZIStructure of AZIAZI ), I (EDOStructure of EDOEDO ), J (EDOStructure of EDOEDO ), K (EDOStructure of EDOEDO ), M (AZIStructure of AZIAZI ), N (EDOStructure of EDOEDO ), O (EDOStructure of EDOEDO ), P (EDOStructure of EDOEDO ), Q (EDOStructure of EDOEDO ), R (EDOStructure of EDOEDO )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 2-249 (1-251)
Mutations (UniProt numbering)
Missing residues 9MET-9MET:17MET-17MET:120MET-120MET:150MET-150MET:205MET-205MET
Nonstandard amino acids Structure of MSEMSE
Uniprot ID O25087 →UniprotKB
label_asym_ids of heme G
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.15 Å
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 2-248 (1-251)
Mutations (UniProt numbering)
Missing residues 9MET-9MET:17MET-17MET:120MET-120MET:150MET-150MET:205MET-205MET
Nonstandard amino acids Structure of MSEMSE
Uniprot ID O25087 →UniprotKB
label_asym_ids of heme L
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.15 Å
Assembly ID:  2  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 2
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (EDOStructure of EDOEDO ), BA (EDOStructure of EDOEDO ), T (AZIStructure of AZIAZI ), U (EDOStructure of EDOEDO ), V (EDOStructure of EDOEDO ), W (EDOStructure of EDOEDO ), Y (AZIStructure of AZIAZI ), Z (EDOStructure of EDOEDO )
Each chain information
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 2-249 (1-251)
Mutations (UniProt numbering)
Missing residues 9MET-9MET:17MET-17MET:120MET-120MET:150MET-150MET:205MET-205MET
Nonstandard amino acids Structure of MSEMSE
Uniprot ID O25087 →UniprotKB
label_asym_ids of heme S
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.14 Å
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 3-249 (1-251)
Mutations (UniProt numbering)
Missing residues 9MET-9MET:17MET-17MET:120MET-120MET:150MET-150MET:205MET-205MET
Nonstandard amino acids Structure of MSEMSE
Uniprot ID O25087 →UniprotKB
label_asym_ids of heme X
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.14 Å
Assembly ID:  3  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 2
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others DA (AZIStructure of AZIAZI ), EA (EDOStructure of EDOEDO ), FA (EDOStructure of EDOEDO ), HA (AZIStructure of AZIAZI ), IA (EDOStructure of EDOEDO ), JA (EDOStructure of EDOEDO ), KA (EDOStructure of EDOEDO ), LA (EDOStructure of EDOEDO ), MA (EDOStructure of EDOEDO ), NA (EDOStructure of EDOEDO )
Each chain information
Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 3-248 (1-251)
Mutations (UniProt numbering)
Missing residues 9MET-9MET:17MET-17MET:120MET-120MET:150MET-150MET:205MET-205MET
Nonstandard amino acids Structure of MSEMSE
Uniprot ID O25087 →UniprotKB
label_asym_ids of heme CA
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 2-249 (1-251)
Mutations (UniProt numbering)
Missing residues 9MET-9MET:17MET-17MET:120MET-120MET:150MET-150MET:205MET-205MET
Nonstandard amino acids Structure of MSEMSE
Uniprot ID O25087 →UniprotKB
label_asym_ids of heme GA
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.16 Å