PDB ID:  pdb_00004fby
  • fs X-ray diffraction of Photosystem II
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 6.56 Å
  • Deposition date: 2012-05-23
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data PDB
Oligomeric count 40
label_asym_ids of protein
40 chains (6 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, P, Q, R, S, T, U, V, W, X, Y, Z
label_asym_ids of heme CE MD NH YG
label_asym_ids of the others
show AB (FE2), AC (LMT), AD (PHO), AE (BCR), AF (CLA), AG (CLA), AH (BCR), BB (SQD), BC (LMT), BD (PL9), BE (BCR), BF (CLA), BG (CLA), BH (SQD), CB (CLA), CC (SQD), CD (CLA), CF (CLA), CG (CLA), CH (BCR), DB (CLA), DC (DGD), DD (LMG), DE (BCR), DF (CLA), DG (BCR), DH (DGD), EB (CLA), EC (LMT), ED (LMG), EE (SQD), EF (CLA), EG (CLA), EH (BCR), FB (CLA), FC (LMT), FD (CLA), FE (CLA), FF (CLA), FG (BCR), FH (LMG), GB (CLA), GC (CLA), GD (BCR), GE (CLA), GF (CLA), GG (CLA), GH (LMT), HB (CLA), HC (CLA), HD (BCT), HE (PHO), HF (CLA), HG (DGD), HH (PL9), IB (CLA), IC (CLA), ID (CL), IE (CLA), IF (CLA), IG (DGD), IH (BCR), JB (CLA), JC (CLA), JD (DGD), JE (PL9), JF (CLA), JG (BCR), JH (BCR), KB (CLA), KC (CLA), KD (LMT), KE (CLA), KF (BCR), KG (LMG), KH (LMT), LB (CLA), LC (CLA), LD (LMG), LE (DGD), LF (CLA), LG (DGD), LH (LMG), MB (CLA), MC (CLA), ME (SQD), MF (CLA), MG (LMG), MH (CA), NB (CLA), NC (CLA), ND (LMG), NE (LHG), NF (LMG), NG (PHO), OA (CLA), OB (CLA), OC (CLA), OD (SQD), OE (LMG), OF (CLA), OG (LMG), PA (CLA), PB (CLA), PC (BCR), PD (BCR), PE (LHG), PF (LMT), PG (PL9), QA (CLA), QB (CLA), QC (CLA), QD (BCR), QE (OEC), QF (LMG), QG (CLA), RA (PHO), RB (CLA), RC (BCR), RD (LMG), RE (FE2), RF (LMT), RG (LMG), SA (CLA), SB (BCR), SC (CLA), SD (LMT), SE (CL), SF (CLA), SG (CLA), TA (PL9), TB (BCR), TC (DGD), TD (PL9), TE (SQD), TF (CLA), TG (SQD), UA (DGD), UB (BCR), UC (CLA), UD (BCR), UE (DGD), UF (CLA), UG (DGD), VA (LHG), VB (BCR), VC (DGD), VD (BCR), VE (LMT), VF (CLA), VG (LMG), WA (SQD), WB (DGD), WC (CLA), WD (LMG), WE (LMT), WF (CLA), WG (LMT), XA (LMG), XB (LMG), XC (DGD), XD (LMT), XE (CLA), XF (CLA), XG (BCT), YA (LHG), YB (LMG), YC (LMG), YD (CA), YE (CLA), YF (CLA), ZA (OEC), ZB (SQD), ZC (LMG), ZD (BCR), ZE (CLA), ZF (CLA), ZG (LMG)
Each chain information

Showing all 40 chains (6 with heme). Show only chains with heme

Chain A  
auth_asym_id A
Residue indices (Uniprot) 10-344 (1-344)
Uniprot ID P0A444 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain AA  
auth_asym_id W
Residue indices (Uniprot) 2-66 (2-66)
Uniprot ID Q8DJ43 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain B  
auth_asym_id B
Residue indices (Uniprot) 2-491 (1-510)
Uniprot ID Q8DIQ1 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BA  
auth_asym_id a
Residue indices (Uniprot) 1-35 (1-38)
Uniprot ID Q8DJZ6 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain C  
auth_asym_id C
Residue indices (Uniprot) 27-473 (1-461)
Uniprot ID Q8DIF8 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain CA  
auth_asym_id b
Residue indices (Uniprot) 7-40 (2-40)
Uniprot ID P59087 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id D
Residue indices (Uniprot) 13-352 (1-352)
Uniprot ID Q8CM25 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain DA  
auth_asym_id c
Residue indices (Uniprot) 10-46 (10-46)
Uniprot ID Q9F1K9 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 3-84 (2-84)
Uniprot ID Q8DIP0 →UniprotKB
label_asym_ids of heme MD
Available structure PDB
Chain EA  
auth_asym_id d
Residue indices (Uniprot) 1-37 (1-37)
Uniprot ID Q8DIN8 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 11-45 (2-45)
Uniprot ID Q8DIN9 →UniprotKB
label_asym_ids of heme MD
Available structure PDB
Chain FA  
auth_asym_id e
Residue indices (Uniprot) 1-34 (1-36)
Uniprot ID Q8DHA7 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id H
Residue indices (Uniprot) 2-66 (2-66)
Uniprot ID Q8DJ43 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain GA  
auth_asym_id f
Residue indices (Uniprot) 30-272 (27-272)
Uniprot ID P0A431 →UniprotKB
S-S bonds 45:70
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id I
Residue indices (Uniprot) 1-35 (1-38)
Uniprot ID Q8DJZ6 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain HA  
auth_asym_id g
Residue indices (Uniprot) 1-32 (1-32)
Uniprot ID Q8DIQ0 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id J
Residue indices (Uniprot) 7-40 (2-40)
Uniprot ID P59087 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain IA  
auth_asym_id h
Residue indices (Uniprot) 38-134 (31-134)
Uniprot ID Q9F1L5 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id K
Residue indices (Uniprot) 10-46 (10-46)
Uniprot ID Q9F1K9 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain JA heme  
auth_asym_id i
Residue indices (Uniprot) 27-163 (27-163)
Uniprot ID P0A386 →UniprotKB
label_asym_ids of heme NH
Available structure PDB
Chain K  
auth_asym_id L
Residue indices (Uniprot) 1-37 (1-37)
Uniprot ID Q8DIN8 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain KA  
auth_asym_id m
Residue indices (Uniprot) 19-46 (1-46)
Uniprot ID Q8DJI1 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id M
Residue indices (Uniprot) 1-34 (1-36)
Uniprot ID Q8DHA7 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain LA  
auth_asym_id j
Residue indices (Uniprot) 11-47 (2-41)
Uniprot ID Q9F1R6 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain M  
auth_asym_id O
Residue indices (Uniprot) 30-272 (27-272)
Uniprot ID P0A431 →UniprotKB
S-S bonds 45:70
label_asym_ids of heme None
Available structure PDB
Chain MA  
auth_asym_id k
Residue indices (Uniprot) 1-28 (-)
Nonstandard amino acids UNK Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain N  
auth_asym_id T
Residue indices (Uniprot) 1-32 (1-32)
Uniprot ID Q8DIQ0 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain NA  
auth_asym_id l
Residue indices (Uniprot) 1-62 (1-62)
Uniprot ID Q8DHJ2 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain O  
auth_asym_id U
Residue indices (Uniprot) 38-134 (31-134)
Uniprot ID Q9F1L5 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain P heme  
auth_asym_id V
Residue indices (Uniprot) 27-163 (27-163)
Uniprot ID P0A386 →UniprotKB
label_asym_ids of heme CE
Available structure PDB
Chain Q  
auth_asym_id y
Residue indices (Uniprot) 19-46 (1-46)
Uniprot ID Q8DJI1 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain R  
auth_asym_id X
Residue indices (Uniprot) 11-47 (2-41)
Uniprot ID Q9F1R6 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id Y
Residue indices (Uniprot) 1-28 (-)
Nonstandard amino acids UNK Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id Z
Residue indices (Uniprot) 1-62 (1-62)
Uniprot ID Q8DHJ2 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain U  
auth_asym_id G
Residue indices (Uniprot) 10-344 (1-344)
Uniprot ID P0A444 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain V  
auth_asym_id N
Residue indices (Uniprot) 2-491 (1-510)
Uniprot ID Q8DIQ1 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain W  
auth_asym_id P
Residue indices (Uniprot) 27-473 (1-461)
Uniprot ID Q8DIF8 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain X  
auth_asym_id Q
Residue indices (Uniprot) 13-352 (1-352)
Uniprot ID Q8CM25 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Y heme  
auth_asym_id R
Residue indices (Uniprot) 3-84 (2-84)
Uniprot ID Q8DIP0 →UniprotKB
label_asym_ids of heme YG
Available structure PDB
Chain Z heme  
auth_asym_id S
Residue indices (Uniprot) 11-45 (2-45)
Uniprot ID Q8DIN9 →UniprotKB
label_asym_ids of heme YG
Available structure PDB