PDB ID:  pdb_00004ub6
  • Native structure of photosystem II (dataset-1) by a femtosecond X-ray laser
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • Deposition date: 2014-08-12
Number of assemblies:  2
Assembly ID:  1  (author_defined_assembly)    
Structural data modeled
Oligomeric count 20
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AB (GOLStructure of GOLGOL ), AC (BCRStructure of BCRBCR ), AD (CLAStructure of CLACLA ), AE (UNLStructure of UNLUNL ), AF (BCRStructure of BCRBCR ), BB (GOLStructure of GOLGOL ), BC (SQDStructure of SQDSQD ), BD (CLAStructure of CLACLA ), BE (UNLStructure of UNLUNL ), BF (GOLStructure of GOLGOL ), CB (SQDStructure of SQDSQD ), CC (LMGStructure of LMGLMG ), CD (CLAStructure of CLACLA ), CE (HTGStructure of HTGHTG ), CF (CLStructure of CLCL ), DB (LMTStructure of LMTLMT ), DC (LMTStructure of LMTLMT ), DD (CLAStructure of CLACLA ), DE (LHGStructure of LHGLHG ), EB (OEXStructure of OEXOEX ), EC (HTGStructure of HTGHTG ), ED (CLAStructure of CLACLA ), EE (LMTStructure of LMTLMT ), EF (HTGStructure of HTGHTG ), FB (PL9Structure of PL9PL9 ), FC (HTGStructure of HTGHTG ), FD (CLAStructure of CLACLA ), FF (GOLStructure of GOLGOL ), GB (UNLStructure of UNLUNL ), GC (HTGStructure of HTGHTG ), GD (BCRStructure of BCRBCR ), GE (SQDStructure of SQDSQD ), GF (GOLStructure of GOLGOL ), HB (CAStructure of CACA ), HC (GOLStructure of GOLGOL ), HD (BCRStructure of BCRBCR ), HE (CAStructure of CACA ), HF (GOLStructure of GOLGOL ), IB (CLAStructure of CLACLA ), IC (GOLStructure of GOLGOL ), ID (DGDStructure of DGDDGD ), IE (GOLStructure of GOLGOL ), IF (GOLStructure of GOLGOL ), JB (CLAStructure of CLACLA ), JC (GOLStructure of GOLGOL ), JD (DGDStructure of DGDDGD ), JE (BCRStructure of BCRBCR ), JF (UNLStructure of UNLUNL ), KB (CLAStructure of CLACLA ), KC (GOLStructure of GOLGOL ), KD (DGDStructure of DGDDGD ), KE (DGDStructure of DGDDGD ), KF (LMGStructure of LMGLMG ), LB (CLAStructure of CLACLA ), LC (GOLStructure of GOLGOL ), LD (LMGStructure of LMGLMG ), LE (UNLStructure of UNLUNL ), MB (CLAStructure of CLACLA ), MC (GOLStructure of GOLGOL ), MD (LMGStructure of LMGLMG ), ME (LMGStructure of LMGLMG ), NA (FE2Structure of FE2FE2 ), NB (CLAStructure of CLACLA ), NC (HTGStructure of HTGHTG ), ND (LMTStructure of LMTLMT ), NE (UNLStructure of UNLUNL ), OA (CLStructure of CLCL ), OB (CLAStructure of CLACLA ), OC (HTGStructure of HTGHTG ), OD (HTGStructure of HTGHTG ), OE (MGStructure of MGMG ), PA (CLStructure of CLCL ), PB (CLAStructure of CLACLA ), PC (UNLStructure of UNLUNL ), PD (HTGStructure of HTGHTG ), PE (UNLStructure of UNLUNL ), QA (BCTStructure of BCTBCT ), QB (CLAStructure of CLACLA ), QC (LMTStructure of LMTLMT ), QD (GOLStructure of GOLGOL ), QE (BCRStructure of BCRBCR ), RA (CLAStructure of CLACLA ), RB (CLAStructure of CLACLA ), RC (GOLStructure of GOLGOL ), RD (GOLStructure of GOLGOL ), RE (BCRStructure of BCRBCR ), SA (CLAStructure of CLACLA ), SB (CLAStructure of CLACLA ), SC (LMGStructure of LMGLMG ), SD (CLAStructure of CLACLA ), SE (LHGStructure of LHGLHG ), TA (CLAStructure of CLACLA ), TB (CLAStructure of CLACLA ), TC (CLAStructure of CLACLA ), TD (CLAStructure of CLACLA ), TE (SQDStructure of SQDSQD ), UA (PHOStructure of PHOPHO ), UB (CLAStructure of CLACLA ), UC (CLAStructure of CLACLA ), UD (BCRStructure of BCRBCR ), UE (LMTStructure of LMTLMT ), VA (PHOStructure of PHOPHO ), VB (CLAStructure of CLACLA ), VC (CLAStructure of CLACLA ), VD (PL9Structure of PL9PL9 ), VE (UNLStructure of UNLUNL ), WA (CLAStructure of CLACLA ), WB (CLAStructure of CLACLA ), WC (CLAStructure of CLACLA ), WD (DGDStructure of DGDDGD ), WE (CAStructure of CACA ), XA (BCRStructure of BCRBCR ), XB (CLAStructure of CLACLA ), XC (CLAStructure of CLACLA ), XD (LHGStructure of LHGLHG ), XE (GOLStructure of GOLGOL ), YA (SQDStructure of SQDSQD ), YB (BCRStructure of BCRBCR ), YC (CLAStructure of CLACLA ), YD (LHGStructure of LHGLHG ), YE (HTGStructure of HTGHTG ), ZA (GOLStructure of GOLGOL ), ZB (BCRStructure of BCRBCR ), ZC (CLAStructure of CLACLA ), ZD (LHGStructure of LHGLHG ), ZE (GOLStructure of GOLGOL )
Each chain information

Showing 3 chains with heme of 20. Show all chains

Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 4-84 (1-84)
Uniprot ID P12238 →UniprotKB
label_asym_ids of heme FE
Available structure PDB
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 12-45 (2-45)
Uniprot ID P12239 →UniprotKB
label_asym_ids of heme FE
Available structure PDB
Chain P heme  
auth_asym_id V
Residue indices (Uniprot) 1-137 (27-163)
Uniprot ID P0A387 →UniprotKB
label_asym_ids of heme DF
Available structure PDB
Assembly ID:  2  (author_defined_assembly)    
Structural data modeled
Oligomeric count 19
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AG (OEXStructure of OEXOEX ), AH (BCRStructure of BCRBCR ), AI (CLAStructure of CLACLA ), AJ (LHGStructure of LHGLHG ), AK (GOLStructure of GOLGOL ), BG (PL9Structure of PL9PL9 ), BH (BCRStructure of BCRBCR ), BI (BCRStructure of BCRBCR ), BK (GOLStructure of GOLGOL ), CG (UNLStructure of UNLUNL ), CH (LMGStructure of LMGLMG ), CI (DGDStructure of DGDDGD ), CJ (GOLStructure of GOLGOL ), CK (BCRStructure of BCRBCR ), DG (BCTStructure of BCTBCT ), DH (LMTStructure of LMTLMT ), DI (DGDStructure of DGDDGD ), DJ (SQDStructure of SQDSQD ), DK (LMGStructure of LMGLMG ), EG (PHOStructure of PHOPHO ), EH (HTGStructure of HTGHTG ), EI (DGDStructure of DGDDGD ), EJ (LMTStructure of LMTLMT ), FG (LMTStructure of LMTLMT ), FH (HTGStructure of HTGHTG ), FI (LMGStructure of LMGLMG ), FJ (CAStructure of CACA ), GG (HTGStructure of HTGHTG ), GH (GOLStructure of GOLGOL ), GI (LMGStructure of LMGLMG ), GJ (BCRStructure of BCRBCR ), HG (HTGStructure of HTGHTG ), HH (GOLStructure of GOLGOL ), HI (LMTStructure of LMTLMT ), HJ (DGDStructure of DGDDGD ), IG (CAStructure of CACA ), IH (GOLStructure of GOLGOL ), II (HTGStructure of HTGHTG ), IJ (UNLStructure of UNLUNL ), JG (CLAStructure of CLACLA ), JH (GOLStructure of GOLGOL ), JI (HTGStructure of HTGHTG ), JJ (LMGStructure of LMGLMG ), KG (CLAStructure of CLACLA ), KH (GOLStructure of GOLGOL ), KI (GOLStructure of GOLGOL ), KJ (UNLStructure of UNLUNL ), LF (LMTStructure of LMTLMT ), LG (CLAStructure of CLACLA ), LH (GOLStructure of GOLGOL ), LI (GOLStructure of GOLGOL ), LJ (MGStructure of MGMG ), MF (SQDStructure of SQDSQD ), MG (CLAStructure of CLACLA ), MH (UNLStructure of UNLUNL ), MI (UNLStructure of UNLUNL ), MJ (BCRStructure of BCRBCR ), NF (FE2Structure of FE2FE2 ), NG (CLAStructure of CLACLA ), NH (CAStructure of CACA ), NI (CLAStructure of CLACLA ), NJ (BCRStructure of BCRBCR ), OF (CLStructure of CLCL ), OG (CLAStructure of CLACLA ), OH (CLAStructure of CLACLA ), OI (CLAStructure of CLACLA ), OJ (LHGStructure of LHGLHG ), PF (CLStructure of CLCL ), PG (CLAStructure of CLACLA ), PH (CLAStructure of CLACLA ), PI (CLAStructure of CLACLA ), PJ (UNLStructure of UNLUNL ), QF (CLAStructure of CLACLA ), QG (CLAStructure of CLACLA ), QH (CLAStructure of CLACLA ), QI (BCRStructure of BCRBCR ), QJ (LMTStructure of LMTLMT ), RF (CLAStructure of CLACLA ), RG (CLAStructure of CLACLA ), RH (CLAStructure of CLACLA ), RI (PL9Structure of PL9PL9 ), RJ (LMTStructure of LMTLMT ), SF (PHOStructure of PHOPHO ), SG (CLAStructure of CLACLA ), SH (CLAStructure of CLACLA ), SI (DGDStructure of DGDDGD ), SJ (LMTStructure of LMTLMT ), TF (CLAStructure of CLACLA ), TG (CLAStructure of CLACLA ), TH (CLAStructure of CLACLA ), TI (LHGStructure of LHGLHG ), TJ (CAStructure of CACA ), UF (BCRStructure of BCRBCR ), UG (CLAStructure of CLACLA ), UH (CLAStructure of CLACLA ), UI (LHGStructure of LHGLHG ), UJ (GOLStructure of GOLGOL ), VF (SQDStructure of SQDSQD ), VG (CLAStructure of CLACLA ), VH (CLAStructure of CLACLA ), VI (LHGStructure of LHGLHG ), VJ (BCRStructure of BCRBCR ), WF (LMGStructure of LMGLMG ), WG (CLAStructure of CLACLA ), WH (CLAStructure of CLACLA ), WI (UNLStructure of UNLUNL ), WJ (GOLStructure of GOLGOL ), XF (GOLStructure of GOLGOL ), XG (CLAStructure of CLACLA ), XH (CLAStructure of CLACLA ), XI (UNLStructure of UNLUNL ), XJ (CLStructure of CLCL ), YF (GOLStructure of GOLGOL ), YG (CLAStructure of CLACLA ), YH (CLAStructure of CLACLA ), YI (HTGStructure of HTGHTG ), ZF (GOLStructure of GOLGOL ), ZG (BCRStructure of BCRBCR ), ZH (CLAStructure of CLACLA ), ZI (UNLStructure of UNLUNL ), ZJ (GOLStructure of GOLGOL )
Each chain information

Showing 3 chains with heme of 19. Show all chains

Chain JA heme  
auth_asym_id v
Residue indices (Uniprot) 1-137 (27-163)
Uniprot ID P0A387 →UniprotKB
label_asym_ids of heme YJ
Available structure PDB
Chain Y heme  
auth_asym_id e
Residue indices (Uniprot) 4-84 (1-84)
Uniprot ID P12238 →UniprotKB
label_asym_ids of heme BJ
Available structure PDB
Chain Z heme  
auth_asym_id f
Residue indices (Uniprot) 14-45 (2-45)
Uniprot ID P12239 →UniprotKB
label_asym_ids of heme BJ
Available structure PDB