PDB ID:  pdb_00004ub8
  • Native structure of photosystem II (dataset-2) by a femtosecond X-ray laser
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • Deposition date: 2014-08-12
Number of assemblies:  2
Assembly ID:  1  (author_defined_assembly)    
Structural data modeled
Oligomeric count 20
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AB (GOLStructure of GOLGOL ), AC (LMGStructure of LMGLMG ), AD (CLAStructure of CLACLA ), AE (UNLStructure of UNLUNL ), AF (GOLStructure of GOLGOL ), BB (UNLStructure of UNLUNL ), BC (HTGStructure of HTGHTG ), BD (CLAStructure of CLACLA ), BE (UNLStructure of UNLUNL ), BF (CLStructure of CLCL ), CB (SQDStructure of SQDSQD ), CC (HTGStructure of HTGHTG ), CD (CLAStructure of CLACLA ), CE (LHGStructure of LHGLHG ), DB (LMTStructure of LMTLMT ), DC (HTGStructure of HTGHTG ), DD (BCRStructure of BCRBCR ), DE (LMTStructure of LMTLMT ), DF (HTGStructure of HTGHTG ), EB (OEXStructure of OEXOEX ), EC (GOLStructure of GOLGOL ), ED (BCRStructure of BCRBCR ), EF (GOLStructure of GOLGOL ), FB (PL9Structure of PL9PL9 ), FC (GOLStructure of GOLGOL ), FD (DGDStructure of DGDDGD ), FE (SQDStructure of SQDSQD ), FF (GOLStructure of GOLGOL ), GB (CAStructure of CACA ), GC (GOLStructure of GOLGOL ), GD (DGDStructure of DGDDGD ), GE (CAStructure of CACA ), GF (GOLStructure of GOLGOL ), HB (CLAStructure of CLACLA ), HC (GOLStructure of GOLGOL ), HD (DGDStructure of DGDDGD ), HE (GOLStructure of GOLGOL ), HF (GOLStructure of GOLGOL ), IB (CLAStructure of CLACLA ), IC (GOLStructure of GOLGOL ), ID (LMGStructure of LMGLMG ), IE (BCRStructure of BCRBCR ), IF (BCRStructure of BCRBCR ), JB (CLAStructure of CLACLA ), JC (HTGStructure of HTGHTG ), JD (LMGStructure of LMGLMG ), JE (DGDStructure of DGDDGD ), JF (UNLStructure of UNLUNL ), KB (CLAStructure of CLACLA ), KC (HTGStructure of HTGHTG ), KD (HTGStructure of HTGHTG ), KE (UNLStructure of UNLUNL ), KF (LMGStructure of LMGLMG ), LB (CLAStructure of CLACLA ), LC (UNLStructure of UNLUNL ), LD (HTGStructure of HTGHTG ), LE (LMTStructure of LMTLMT ), MB (CLAStructure of CLACLA ), MC (GOLStructure of GOLGOL ), MD (GOLStructure of GOLGOL ), ME (LMGStructure of LMGLMG ), NA (FE2Structure of FE2FE2 ), NB (CLAStructure of CLACLA ), NC (LMTStructure of LMTLMT ), ND (GOLStructure of GOLGOL ), NE (MGStructure of MGMG ), OA (CLStructure of CLCL ), OB (CLAStructure of CLACLA ), OC (GOLStructure of GOLGOL ), OD (UNLStructure of UNLUNL ), OE (UNLStructure of UNLUNL ), PA (CLStructure of CLCL ), PB (CLAStructure of CLACLA ), PC (LMGStructure of LMGLMG ), PD (CLAStructure of CLACLA ), PE (BCRStructure of BCRBCR ), QA (BCTStructure of BCTBCT ), QB (CLAStructure of CLACLA ), QC (CLAStructure of CLACLA ), QD (LMTStructure of LMTLMT ), QE (LHGStructure of LHGLHG ), RA (CLAStructure of CLACLA ), RB (CLAStructure of CLACLA ), RC (CLAStructure of CLACLA ), RD (CLAStructure of CLACLA ), RE (LMTStructure of LMTLMT ), SA (CLAStructure of CLACLA ), SB (CLAStructure of CLACLA ), SC (CLAStructure of CLACLA ), SD (CLAStructure of CLACLA ), SE (LMTStructure of LMTLMT ), TA (PHOStructure of PHOPHO ), TB (CLAStructure of CLACLA ), TC (CLAStructure of CLACLA ), TD (BCRStructure of BCRBCR ), TE (UNLStructure of UNLUNL ), UA (PHOStructure of PHOPHO ), UB (CLAStructure of CLACLA ), UC (CLAStructure of CLACLA ), UD (PL9Structure of PL9PL9 ), UE (CAStructure of CACA ), VA (CLAStructure of CLACLA ), VB (CLAStructure of CLACLA ), VC (CLAStructure of CLACLA ), VD (DGDStructure of DGDDGD ), VE (GOLStructure of GOLGOL ), WA (BCRStructure of BCRBCR ), WB (CLAStructure of CLACLA ), WC (CLAStructure of CLACLA ), WD (LHGStructure of LHGLHG ), WE (HTGStructure of HTGHTG ), XA (SQDStructure of SQDSQD ), XB (BCRStructure of BCRBCR ), XC (CLAStructure of CLACLA ), XD (LHGStructure of LHGLHG ), XE (GOLStructure of GOLGOL ), YA (GOLStructure of GOLGOL ), YB (BCRStructure of BCRBCR ), YC (CLAStructure of CLACLA ), YD (LHGStructure of LHGLHG ), YE (BCRStructure of BCRBCR ), ZA (GOLStructure of GOLGOL ), ZB (BCRStructure of BCRBCR ), ZC (CLAStructure of CLACLA ), ZD (HTGStructure of HTGHTG ), ZE (GOLStructure of GOLGOL )
Each chain information

Showing 3 chains with heme of 20. Show all chains

Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 4-84 (1-84)
Uniprot ID P12238 →UniprotKB
label_asym_ids of heme EE
Available structure PDB
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 12-45 (2-45)
Uniprot ID P12239 →UniprotKB
label_asym_ids of heme EE
Available structure PDB
Chain P heme  
auth_asym_id V
Residue indices (Uniprot) 1-137 (27-163)
Uniprot ID P0A387 →UniprotKB
label_asym_ids of heme CF
Available structure PDB
Assembly ID:  2  (author_defined_assembly)    
Structural data modeled
Oligomeric count 19
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AG (PL9Structure of PL9PL9 ), AH (BCRStructure of BCRBCR ), AI (BCRStructure of BCRBCR ), AK (GOLStructure of GOLGOL ), BG (LMTStructure of LMTLMT ), BH (LMGStructure of LMGLMG ), BI (DGDStructure of DGDDGD ), BJ (SQDStructure of SQDSQD ), BK (GOLStructure of GOLGOL ), CG (BCTStructure of BCTBCT ), CH (LMTStructure of LMTLMT ), CI (DGDStructure of DGDDGD ), CJ (LMTStructure of LMTLMT ), CK (BCRStructure of BCRBCR ), DG (SQDStructure of SQDSQD ), DH (HTGStructure of HTGHTG ), DI (DGDStructure of DGDDGD ), DJ (CAStructure of CACA ), DK (UNLStructure of UNLUNL ), EG (LMTStructure of LMTLMT ), EH (HTGStructure of HTGHTG ), EI (LMGStructure of LMGLMG ), EJ (GOLStructure of GOLGOL ), EK (LMGStructure of LMGLMG ), FG (HTGStructure of HTGHTG ), FH (GOLStructure of GOLGOL ), FI (LMGStructure of LMGLMG ), FJ (BCRStructure of BCRBCR ), GG (HTGStructure of HTGHTG ), GH (GOLStructure of GOLGOL ), GI (HTGStructure of HTGHTG ), GJ (DGDStructure of DGDDGD ), HG (CAStructure of CACA ), HH (GOLStructure of GOLGOL ), HI (HTGStructure of HTGHTG ), HJ (UNLStructure of UNLUNL ), IG (CLAStructure of CLACLA ), IH (GOLStructure of GOLGOL ), II (GOLStructure of GOLGOL ), IJ (LMGStructure of LMGLMG ), JG (CLAStructure of CLACLA ), JH (GOLStructure of GOLGOL ), JI (GOLStructure of GOLGOL ), JJ (MGStructure of MGMG ), KG (CLAStructure of CLACLA ), KH (UNLStructure of UNLUNL ), KI (BCRStructure of BCRBCR ), KJ (UNLStructure of UNLUNL ), LF (LMTStructure of LMTLMT ), LG (CLAStructure of CLACLA ), LH (LMGStructure of LMGLMG ), LI (GOLStructure of GOLGOL ), LJ (UNLStructure of UNLUNL ), MF (SQDStructure of SQDSQD ), MG (CLAStructure of CLACLA ), MH (CAStructure of CACA ), MI (CLAStructure of CLACLA ), MJ (UNLStructure of UNLUNL ), NF (FE2Structure of FE2FE2 ), NG (CLAStructure of CLACLA ), NH (CLAStructure of CLACLA ), NI (CLAStructure of CLACLA ), NJ (BCRStructure of BCRBCR ), OF (CLStructure of CLCL ), OG (CLAStructure of CLACLA ), OH (CLAStructure of CLACLA ), OI (PHOStructure of PHOPHO ), OJ (SQDStructure of SQDSQD ), PF (CLStructure of CLCL ), PG (CLAStructure of CLACLA ), PH (CLAStructure of CLACLA ), PI (CLAStructure of CLACLA ), PJ (LHGStructure of LHGLHG ), QF (CLAStructure of CLACLA ), QG (CLAStructure of CLACLA ), QH (CLAStructure of CLACLA ), QI (BCRStructure of BCRBCR ), QJ (UNLStructure of UNLUNL ), RF (CLAStructure of CLACLA ), RG (CLAStructure of CLACLA ), RH (CLAStructure of CLACLA ), RI (PL9Structure of PL9PL9 ), RJ (LMTStructure of LMTLMT ), SF (PHOStructure of PHOPHO ), SG (CLAStructure of CLACLA ), SH (CLAStructure of CLACLA ), SI (DGDStructure of DGDDGD ), SJ (LMTStructure of LMTLMT ), TF (CLAStructure of CLACLA ), TG (CLAStructure of CLACLA ), TH (CLAStructure of CLACLA ), TI (LHGStructure of LHGLHG ), TJ (CAStructure of CACA ), UF (BCRStructure of BCRBCR ), UG (CLAStructure of CLACLA ), UH (CLAStructure of CLACLA ), UI (LHGStructure of LHGLHG ), UJ (BCRStructure of BCRBCR ), VF (SQDStructure of SQDSQD ), VG (CLAStructure of CLACLA ), VH (CLAStructure of CLACLA ), VI (LHGStructure of LHGLHG ), VJ (GOLStructure of GOLGOL ), WF (GOLStructure of GOLGOL ), WG (CLAStructure of CLACLA ), WH (CLAStructure of CLACLA ), WI (HTGStructure of HTGHTG ), WJ (CLStructure of CLCL ), XF (GOLStructure of GOLGOL ), XG (CLAStructure of CLACLA ), XH (CLAStructure of CLACLA ), XI (UNLStructure of UNLUNL ), XJ (GOLStructure of GOLGOL ), YF (UNLStructure of UNLUNL ), YG (BCRStructure of BCRBCR ), YH (CLAStructure of CLACLA ), YI (UNLStructure of UNLUNL ), ZF (OEXStructure of OEXOEX ), ZG (BCRStructure of BCRBCR ), ZH (CLAStructure of CLACLA ), ZI (LHGStructure of LHGLHG ), ZJ (GOLStructure of GOLGOL )
Each chain information

Showing 3 chains with heme of 19. Show all chains

Chain JA heme  
auth_asym_id v
Residue indices (Uniprot) 1-137 (27-163)
Uniprot ID P0A387 →UniprotKB
label_asym_ids of heme YJ
Available structure PDB
Chain Y heme  
auth_asym_id e
Residue indices (Uniprot) 4-84 (1-84)
Uniprot ID P12238 →UniprotKB
label_asym_ids of heme AJ
Available structure PDB
Chain Z heme  
auth_asym_id f
Residue indices (Uniprot) 14-45 (2-45)
Uniprot ID P12239 →UniprotKB
label_asym_ids of heme AJ
Available structure PDB