PDB ID:  pdb_00005gti
  • Native XFEL structure of photosystem II (two flash dataset)
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • Deposition date: 2016-08-20
Number of assemblies:  2
Assembly ID:  1  (author_defined_assembly)    
Structural data modeled
Oligomeric count 20
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AB (UNLStructure of UNLUNL ), AC (HTGStructure of HTGHTG ), AD (BCRStructure of BCRBCR ), AE (LMTStructure of LMTLMT ), BB (LHGStructure of LHGLHG ), BC (HTGStructure of HTGHTG ), BD (DGDStructure of DGDDGD ), CB (BCTStructure of BCTBCT ), CC (HTGStructure of HTGHTG ), CD (DGDStructure of DGDDGD ), CE (BCRStructure of BCRBCR ), DB (CAStructure of CACA ), DC (GOLStructure of GOLGOL ), DD (DGDStructure of DGDDGD ), DE (DGDStructure of DGDDGD ), EB (CLAStructure of CLACLA ), EC (GOLStructure of GOLGOL ), ED (LMGStructure of LMGLMG ), EE (UNLStructure of UNLUNL ), FB (CLAStructure of CLACLA ), FC (HTGStructure of HTGHTG ), FD (LMGStructure of LMGLMG ), FE (LMGStructure of LMGLMG ), GB (CLAStructure of CLACLA ), GC (HTGStructure of HTGHTG ), GD (LMTStructure of LMTLMT ), GE (UNLStructure of UNLUNL ), HB (CLAStructure of CLACLA ), HC (UNLStructure of UNLUNL ), HD (HTGStructure of HTGHTG ), HE (MGStructure of MGMG ), IB (CLAStructure of CLACLA ), IC (LMTStructure of LMTLMT ), ID (HTGStructure of HTGHTG ), IE (UNLStructure of UNLUNL ), JB (CLAStructure of CLACLA ), JC (LMTStructure of LMTLMT ), JD (GOLStructure of GOLGOL ), JE (LHGStructure of LHGLHG ), KB (CLAStructure of CLACLA ), KC (LMTStructure of LMTLMT ), KD (CAStructure of CACA ), KE (SQDStructure of SQDSQD ), LB (CLAStructure of CLACLA ), LC (LMGStructure of LMGLMG ), LD (BCRStructure of BCRBCR ), LE (LMTStructure of LMTLMT ), MB (CLAStructure of CLACLA ), MC (CLAStructure of CLACLA ), MD (CLAStructure of CLACLA ), ME (UNLStructure of UNLUNL ), NA (FE2Structure of FE2FE2 ), NB (CLAStructure of CLACLA ), NC (CLAStructure of CLACLA ), ND (PHOStructure of PHOPHO ), NE (LMTStructure of LMTLMT ), OA (CLStructure of CLCL ), OB (CLAStructure of CLACLA ), OC (CLAStructure of CLACLA ), OD (LMTStructure of LMTLMT ), OE (CAStructure of CACA ), PA (CLStructure of CLCL ), PB (CLAStructure of CLACLA ), PC (CLAStructure of CLACLA ), PD (CLAStructure of CLACLA ), PE (GOLStructure of GOLGOL ), QA (CLAStructure of CLACLA ), QB (CLAStructure of CLACLA ), QC (CLAStructure of CLACLA ), QD (CLAStructure of CLACLA ), QE (BCRStructure of BCRBCR ), RA (CLAStructure of CLACLA ), RB (CLAStructure of CLACLA ), RC (CLAStructure of CLACLA ), RD (BCRStructure of BCRBCR ), RE (CAStructure of CACA ), SA (PHOStructure of PHOPHO ), SB (CLAStructure of CLACLA ), SC (CLAStructure of CLACLA ), SD (PL9Structure of PL9PL9 ), TA (CLAStructure of CLACLA ), TB (CLAStructure of CLACLA ), TC (CLAStructure of CLACLA ), TD (LHGStructure of LHGLHG ), TE (HTGStructure of HTGHTG ), UA (BCRStructure of BCRBCR ), UB (BCRStructure of BCRBCR ), UC (CLAStructure of CLACLA ), UD (LHGStructure of LHGLHG ), UE (UNLStructure of UNLUNL ), VA (SQDStructure of SQDSQD ), VB (BCRStructure of BCRBCR ), VC (CLAStructure of CLACLA ), VD (UNLStructure of UNLUNL ), VE (BCRStructure of BCRBCR ), WA (GOLStructure of GOLGOL ), WB (BCRStructure of BCRBCR ), WC (CLAStructure of CLACLA ), WD (UNLStructure of UNLUNL ), WE (LMGStructure of LMGLMG ), XA (SQDStructure of SQDSQD ), XB (SQDStructure of SQDSQD ), XC (CLAStructure of CLACLA ), XD (HTGStructure of HTGHTG ), YA (OEXStructure of OEXOEX ), YB (LMGStructure of LMGLMG ), YC (CLAStructure of CLACLA ), YD (SQDStructure of SQDSQD ), ZA (PL9Structure of PL9PL9 ), ZB (LMTStructure of LMTLMT ), ZC (BCRStructure of BCRBCR ), ZD (LHGStructure of LHGLHG )
Each chain information

Showing 3 chains with heme of 20. Show all chains

Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 4-84 (1-84)
Uniprot ID P12238 →UniprotKB
label_asym_ids of heme BE
Available structure PDB
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 12-45 (2-45)
Uniprot ID P12239 →UniprotKB
label_asym_ids of heme BE
Available structure PDB
Chain P heme  
auth_asym_id V
Residue indices (Uniprot) 1-137 (27-163)
Uniprot ID P0A387 →UniprotKB
label_asym_ids of heme SE
Available structure PDB
Assembly ID:  2  (author_defined_assembly)    
Structural data modeled
Oligomeric count 19
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AF (CLAStructure of CLACLA ), AG (CLAStructure of CLACLA ), AH (CLAStructure of CLACLA ), AI (LHGStructure of LHGLHG ), BF (CLAStructure of CLACLA ), BG (CLAStructure of CLACLA ), BH (CLAStructure of CLACLA ), BI (UNLStructure of UNLUNL ), CF (CLAStructure of CLACLA ), CG (CLAStructure of CLACLA ), CH (CLAStructure of CLACLA ), CI (LHGStructure of LHGLHG ), DF (PHOStructure of PHOPHO ), DG (CLAStructure of CLACLA ), DH (CLAStructure of CLACLA ), DI (LMTStructure of LMTLMT ), EF (PHOStructure of PHOPHO ), EG (CLAStructure of CLACLA ), EH (CLAStructure of CLACLA ), FF (CLAStructure of CLACLA ), FG (CLAStructure of CLACLA ), FH (CLAStructure of CLACLA ), FI (SQDStructure of SQDSQD ), GF (BCRStructure of BCRBCR ), GG (BCRStructure of BCRBCR ), GH (CLAStructure of CLACLA ), GI (HTGStructure of HTGHTG ), HF (SQDStructure of SQDSQD ), HG (BCRStructure of BCRBCR ), HH (BCRStructure of BCRBCR ), HI (BCRStructure of BCRBCR ), IF (GOLStructure of GOLGOL ), IG (BCRStructure of BCRBCR ), IH (BCRStructure of BCRBCR ), II (DGDStructure of DGDDGD ), JF (SQDStructure of SQDSQD ), JG (LMTStructure of LMTLMT ), JH (DGDStructure of DGDDGD ), JI (UNLStructure of UNLUNL ), KF (OEXStructure of OEXOEX ), KG (HTGStructure of HTGHTG ), KH (DGDStructure of DGDDGD ), KI (LMGStructure of LMGLMG ), LF (PL9Structure of PL9PL9 ), LG (HTGStructure of HTGHTG ), LH (DGDStructure of DGDDGD ), LI (UNLStructure of UNLUNL ), MF (UNLStructure of UNLUNL ), MG (HTGStructure of HTGHTG ), MH (LMGStructure of LMGLMG ), MI (MGStructure of MGMG ), NF (LMGStructure of LMGLMG ), NG (GOLStructure of GOLGOL ), NH (LMGStructure of LMGLMG ), NI (BCRStructure of BCRBCR ), OF (LMTStructure of LMTLMT ), OG (HTGStructure of HTGHTG ), OH (HTGStructure of HTGHTG ), OI (LMGStructure of LMGLMG ), PF (BCTStructure of BCTBCT ), PG (HTGStructure of HTGHTG ), PH (HTGStructure of HTGHTG ), PI (UNLStructure of UNLUNL ), QF (CLAStructure of CLACLA ), QG (UNLStructure of UNLUNL ), QH (CAStructure of CACA ), QI (LMTStructure of LMTLMT ), RF (CLAStructure of CLACLA ), RG (LMTStructure of LMTLMT ), RH (CAStructure of CACA ), RI (CAStructure of CACA ), SF (CLAStructure of CLACLA ), SG (UNLStructure of UNLUNL ), SH (UNLStructure of UNLUNL ), SI (BCRStructure of BCRBCR ), TF (CLAStructure of CLACLA ), TG (LHGStructure of LHGLHG ), TH (GOLStructure of GOLGOL ), UF (CLAStructure of CLACLA ), UG (CLAStructure of CLACLA ), UH (CLAStructure of CLACLA ), UI (UNLStructure of UNLUNL ), VF (CLAStructure of CLACLA ), VG (CLAStructure of CLACLA ), VH (CLAStructure of CLACLA ), VI (BCRStructure of BCRBCR ), WF (CLAStructure of CLACLA ), WG (CLAStructure of CLACLA ), WH (BCRStructure of BCRBCR ), WI (LMGStructure of LMGLMG ), XE (FE2Structure of FE2FE2 ), XF (CLAStructure of CLACLA ), XG (CLAStructure of CLACLA ), XH (PL9Structure of PL9PL9 ), YE (CLStructure of CLCL ), YF (CLAStructure of CLACLA ), YG (CLAStructure of CLACLA ), YH (LHGStructure of LHGLHG ), ZE (CLStructure of CLCL ), ZF (CLAStructure of CLACLA ), ZG (CLAStructure of CLACLA ), ZH (LHGStructure of LHGLHG )
Each chain information

Showing 3 chains with heme of 19. Show all chains

Chain JA heme  
auth_asym_id v
Residue indices (Uniprot) 1-137 (27-163)
Uniprot ID P0A387 →UniprotKB
label_asym_ids of heme TI
Available structure PDB
Chain Y heme  
auth_asym_id e
Residue indices (Uniprot) 6-84 (1-84)
Uniprot ID P12238 →UniprotKB
label_asym_ids of heme EI
Available structure PDB
Chain Z heme  
auth_asym_id f
Residue indices (Uniprot) 15-45 (2-45)
Uniprot ID P12239 →UniprotKB
label_asym_ids of heme EI
Available structure PDB