PDB ID:  pdb_00005h2f
  • Crystal structure of the PsbM-deletion mutant of photosystem II
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • Deposition date: 2016-10-15
Number of assemblies:  2
Assembly ID:  1  (author_defined_assembly)    
Structural data modeled
Oligomeric count 18
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AB (DMSStructure of DMSDMS ), AC (LMTStructure of LMTLMT ), AD (CLAStructure of CLACLA ), AE (HTGStructure of HTGHTG ), AF (DMSStructure of DMSDMS ), AG (DMSStructure of DMSDMS ), AH (UNLStructure of UNLUNL ), BB (DMSStructure of DMSDMS ), BC (HTGStructure of HTGHTG ), BD (CLAStructure of CLACLA ), BE (DMSStructure of DMSDMS ), BF (LMTStructure of LMTLMT ), BG (DMSStructure of DMSDMS ), BH (LMTStructure of LMTLMT ), CB (DMSStructure of DMSDMS ), CC (UNLStructure of UNLUNL ), CD (CLAStructure of CLACLA ), CE (DMSStructure of DMSDMS ), CG (DMSStructure of DMSDMS ), CH (UNLStructure of UNLUNL ), DB (DMSStructure of DMSDMS ), DC (UNLStructure of UNLUNL ), DD (CLAStructure of CLACLA ), DE (DMSStructure of DMSDMS ), DF (DMSStructure of DMSDMS ), DG (DMSStructure of DMSDMS ), EB (BCTStructure of BCTBCT ), EC (HTGStructure of HTGHTG ), ED (CLAStructure of CLACLA ), EE (DMSStructure of DMSDMS ), EF (RRXStructure of RRXRRX ), EG (DMSStructure of DMSDMS ), FB (CAStructure of CACA ), FC (HTGStructure of HTGHTG ), FD (CLAStructure of CLACLA ), FE (DMSStructure of DMSDMS ), FF (DGDStructure of DGDDGD ), FG (DMSStructure of DMSDMS ), GB (CLAStructure of CLACLA ), GC (DMSStructure of DMSDMS ), GD (CLAStructure of CLACLA ), GE (DMSStructure of DMSDMS ), GF (DMSStructure of DMSDMS ), GG (DMSStructure of DMSDMS ), HB (CLAStructure of CLACLA ), HC (DMSStructure of DMSDMS ), HD (CLAStructure of CLACLA ), HE (DMSStructure of DMSDMS ), HF (DMSStructure of DMSDMS ), HG (DMSStructure of DMSDMS ), IB (CLAStructure of CLACLA ), IC (DMSStructure of DMSDMS ), ID (CLAStructure of CLACLA ), IE (DMSStructure of DMSDMS ), IF (LMTStructure of LMTLMT ), IG (UNLStructure of UNLUNL ), JB (CLAStructure of CLACLA ), JC (DMSStructure of DMSDMS ), JD (BCRStructure of BCRBCR ), JE (CLAStructure of CLACLA ), JF (UNLStructure of UNLUNL ), JG (LMTStructure of LMTLMT ), KA (OEXStructure of OEXOEX ), KB (CLAStructure of CLACLA ), KC (DMSStructure of DMSDMS ), KD (BCRStructure of BCRBCR ), KE (PHOStructure of PHOPHO ), KF (UNLStructure of UNLUNL ), KG (UNLStructure of UNLUNL ), LA (FE2Structure of FE2FE2 ), LB (CLAStructure of CLACLA ), LC (DMSStructure of DMSDMS ), LD (DGDStructure of DGDDGD ), LE (CLAStructure of CLACLA ), LF (UNLStructure of UNLUNL ), LG (DMSStructure of DMSDMS ), MA (CLStructure of CLCL ), MB (CLAStructure of CLACLA ), MC (DMSStructure of DMSDMS ), MD (DGDStructure of DGDDGD ), ME (CLAStructure of CLACLA ), MF (DMSStructure of DMSDMS ), MG (DMSStructure of DMSDMS ), NA (CLStructure of CLCL ), NB (CLAStructure of CLACLA ), NC (DMSStructure of DMSDMS ), ND (DGDStructure of DGDDGD ), NE (BCRStructure of BCRBCR ), NF (LMGStructure of LMGLMG ), NG (DMSStructure of DMSDMS ), OA (CLAStructure of CLACLA ), OB (CLAStructure of CLACLA ), OC (DMSStructure of DMSDMS ), OD (LMGStructure of LMGLMG ), OE (PL9Structure of PL9PL9 ), OF (MGStructure of MGMG ), PA (CLAStructure of CLACLA ), PB (CLAStructure of CLACLA ), PC (DMSStructure of DMSDMS ), PD (HTGStructure of HTGHTG ), PE (DGDStructure of DGDDGD ), PF (UNLStructure of UNLUNL ), PG (HTGStructure of HTGHTG ), QA (PHOStructure of PHOPHO ), QB (CLAStructure of CLACLA ), QC (DMSStructure of DMSDMS ), QD (LHGStructure of LHGLHG ), QE (SQDStructure of SQDSQD ), QF (BCRStructure of BCRBCR ), QG (DMSStructure of DMSDMS ), RA (CLAStructure of CLACLA ), RB (CLAStructure of CLACLA ), RC (DMSStructure of DMSDMS ), RD (HTGStructure of HTGHTG ), RE (LHGStructure of LHGLHG ), RF (MGStructure of MGMG ), RG (DMSStructure of DMSDMS ), SA (BCRStructure of BCRBCR ), SB (CLAStructure of CLACLA ), SC (DMSStructure of DMSDMS ), SD (DMSStructure of DMSDMS ), SE (LHGStructure of LHGLHG ), SF (LHGStructure of LHGLHG ), SG (DMSStructure of DMSDMS ), TA (LMGStructure of LMGLMG ), TB (CLAStructure of CLACLA ), TC (DMSStructure of DMSDMS ), TD (DMSStructure of DMSDMS ), TE (LHGStructure of LHGLHG ), TF (DMSStructure of DMSDMS ), TG (DMSStructure of DMSDMS ), UA (PL9Structure of PL9PL9 ), UB (CLAStructure of CLACLA ), UC (DMSStructure of DMSDMS ), UD (DMSStructure of DMSDMS ), UE (LMGStructure of LMGLMG ), UF (UNLStructure of UNLUNL ), UG (DMSStructure of DMSDMS ), VA (LHGStructure of LHGLHG ), VB (CLAStructure of CLACLA ), VC (SQDStructure of SQDSQD ), VD (DMSStructure of DMSDMS ), VE (UNLStructure of UNLUNL ), VF (CAStructure of CACA ), VG (DMSStructure of DMSDMS ), WA (SQDStructure of SQDSQD ), WB (BCRStructure of BCRBCR ), WC (CLAStructure of CLACLA ), WD (DMSStructure of DMSDMS ), WE (HTGStructure of HTGHTG ), WF (DMSStructure of DMSDMS ), WG (DMSStructure of DMSDMS ), XA (LMTStructure of LMTLMT ), XB (BCRStructure of BCRBCR ), XC (CLAStructure of CLACLA ), XD (DMSStructure of DMSDMS ), XE (HTGStructure of HTGHTG ), XF (DMSStructure of DMSDMS ), XG (DMSStructure of DMSDMS ), YA (UNLStructure of UNLUNL ), YB (BCRStructure of BCRBCR ), YC (CLAStructure of CLACLA ), YD (DMSStructure of DMSDMS ), YE (DMSStructure of DMSDMS ), YF (DMSStructure of DMSDMS ), YG (DMSStructure of DMSDMS ), ZA (DMSStructure of DMSDMS ), ZB (LMGStructure of LMGLMG ), ZC (CLAStructure of CLACLA ), ZD (LMGStructure of LMGLMG ), ZE (DMSStructure of DMSDMS ), ZF (DMSStructure of DMSDMS ), ZG (BCRStructure of BCRBCR )
Each chain information

Showing 3 chains with heme of 18. Show all chains

Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 5-83 (5-84)
Uniprot ID Q8DIP0 →UniprotKB
label_asym_ids of heme CF
Available structure PDB
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 13-45 (13-45)
Uniprot ID Q8DIN9 →UniprotKB
label_asym_ids of heme CF
Available structure PDB
Chain O heme  
auth_asym_id V
Residue indices (Uniprot) 1-137 (27-163)
Uniprot ID P0A386 →UniprotKB
label_asym_ids of heme OG
Available structure PDB
Assembly ID:  2  (author_defined_assembly)    
Structural data modeled
Oligomeric count 18
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AI (DMSStructure of DMSDMS ), AJ (UNLStructure of UNLUNL ), AK (CLAStructure of CLACLA ), AL (DMSStructure of DMSDMS ), AM (DGDStructure of DGDDGD ), AN (LMTStructure of LMTLMT ), BI (DMSStructure of DMSDMS ), BJ (HTGStructure of HTGHTG ), BK (CLAStructure of CLACLA ), BL (DMSStructure of DMSDMS ), BM (LMGStructure of LMGLMG ), BN (UNLStructure of UNLUNL ), CI (CAStructure of CACA ), CJ (HTGStructure of HTGHTG ), CK (BCRStructure of BCRBCR ), CL (DMSStructure of DMSDMS ), CM (UNLStructure of UNLUNL ), CN (DMSStructure of DMSDMS ), DH (DMSStructure of DMSDMS ), DI (CLAStructure of CLACLA ), DJ (UNLStructure of UNLUNL ), DK (BCRStructure of BCRBCR ), DL (DMSStructure of DMSDMS ), DM (UNLStructure of UNLUNL ), DN (DMSStructure of DMSDMS ), EH (DMSStructure of DMSDMS ), EI (CLAStructure of CLACLA ), EJ (DMSStructure of DMSDMS ), EK (DGDStructure of DGDDGD ), EL (DMSStructure of DMSDMS ), EM (UNLStructure of UNLUNL ), EN (DMSStructure of DMSDMS ), FH (OEXStructure of OEXOEX ), FI (CLAStructure of CLACLA ), FJ (DMSStructure of DMSDMS ), FK (DGDStructure of DGDDGD ), FL (DMSStructure of DMSDMS ), FM (UNLStructure of UNLUNL ), FN (UNLStructure of UNLUNL ), GH (FE2Structure of FE2FE2 ), GI (CLAStructure of CLACLA ), GJ (DMSStructure of DMSDMS ), GK (DGDStructure of DGDDGD ), GL (LHGStructure of LHGLHG ), GM (DMSStructure of DMSDMS ), GN (DMSStructure of DMSDMS ), HH (CLStructure of CLCL ), HI (CLAStructure of CLACLA ), HJ (HTGStructure of HTGHTG ), HK (LMGStructure of LMGLMG ), HL (CLAStructure of CLACLA ), HM (LMGStructure of LMGLMG ), HN (DMSStructure of DMSDMS ), IH (CLStructure of CLCL ), II (CLAStructure of CLACLA ), IJ (DMSStructure of DMSDMS ), IK (LMTStructure of LMTLMT ), IL (CLAStructure of CLACLA ), IM (MGStructure of MGMG ), IN (DMSStructure of DMSDMS ), JH (CLAStructure of CLACLA ), JI (CLAStructure of CLACLA ), JJ (DMSStructure of DMSDMS ), JK (HTGStructure of HTGHTG ), JL (BCRStructure of BCRBCR ), JM (UNLStructure of UNLUNL ), JN (DMSStructure of DMSDMS ), KH (CLAStructure of CLACLA ), KI (CLAStructure of CLACLA ), KJ (DMSStructure of DMSDMS ), KK (DMSStructure of DMSDMS ), KL (PL9Structure of PL9PL9 ), KM (BCRStructure of BCRBCR ), KN (DMSStructure of DMSDMS ), LH (CLAStructure of CLACLA ), LI (CLAStructure of CLACLA ), LJ (DMSStructure of DMSDMS ), LK (DMSStructure of DMSDMS ), LL (DGDStructure of DGDDGD ), LM (MGStructure of MGMG ), MH (PHOStructure of PHOPHO ), MI (CLAStructure of CLACLA ), MJ (DMSStructure of DMSDMS ), MK (DMSStructure of DMSDMS ), ML (LHGStructure of LHGLHG ), MM (SQDStructure of SQDSQD ), MN (HTGStructure of HTGHTG ), NH (PHOStructure of PHOPHO ), NI (CLAStructure of CLACLA ), NJ (DMSStructure of DMSDMS ), NK (DMSStructure of DMSDMS ), NL (LHGStructure of LHGLHG ), NM (LHGStructure of LHGLHG ), NN (DMSStructure of DMSDMS ), OH (CLAStructure of CLACLA ), OI (CLAStructure of CLACLA ), OJ (CAStructure of CACA ), OK (DMSStructure of DMSDMS ), OL (LMGStructure of LMGLMG ), OM (DMSStructure of DMSDMS ), ON (DMSStructure of DMSDMS ), PH (BCRStructure of BCRBCR ), PI (CLAStructure of CLACLA ), PJ (CLAStructure of CLACLA ), PK (DMSStructure of DMSDMS ), PL (UNLStructure of UNLUNL ), PM (DMSStructure of DMSDMS ), PN (DMSStructure of DMSDMS ), QH (SQDStructure of SQDSQD ), QI (CLAStructure of CLACLA ), QJ (CLAStructure of CLACLA ), QK (DMSStructure of DMSDMS ), QL (DMSStructure of DMSDMS ), QM (DMSStructure of DMSDMS ), QN (DMSStructure of DMSDMS ), RH (PL9Structure of PL9PL9 ), RI (CLAStructure of CLACLA ), RJ (CLAStructure of CLACLA ), RK (LMGStructure of LMGLMG ), RL (DMSStructure of DMSDMS ), RM (HTGStructure of HTGHTG ), RN (DMSStructure of DMSDMS ), SH (LHGStructure of LHGLHG ), SI (CLAStructure of CLACLA ), SJ (CLAStructure of CLACLA ), SK (LMTStructure of LMTLMT ), SL (DMSStructure of DMSDMS ), SM (CAStructure of CACA ), SN (DMSStructure of DMSDMS ), TH (UNLStructure of UNLUNL ), TI (BCRStructure of BCRBCR ), TJ (CLAStructure of CLACLA ), TK (UNLStructure of UNLUNL ), TL (DMSStructure of DMSDMS ), TM (DMSStructure of DMSDMS ), TN (DMSStructure of DMSDMS ), UH (SQDStructure of SQDSQD ), UI (BCRStructure of BCRBCR ), UJ (CLAStructure of CLACLA ), UK (DMSStructure of DMSDMS ), UL (DMSStructure of DMSDMS ), UM (DMSStructure of DMSDMS ), UN (DMSStructure of DMSDMS ), VH (LMTStructure of LMTLMT ), VI (BCRStructure of BCRBCR ), VJ (CLAStructure of CLACLA ), VK (DMSStructure of DMSDMS ), VM (DMSStructure of DMSDMS ), VN (BCRStructure of BCRBCR ), WH (UNLStructure of UNLUNL ), WI (SQDStructure of SQDSQD ), WJ (CLAStructure of CLACLA ), WK (DMSStructure of DMSDMS ), WL (SQDStructure of SQDSQD ), WM (DMSStructure of DMSDMS ), WN (UNLStructure of UNLUNL ), XH (DMSStructure of DMSDMS ), XI (LMGStructure of LMGLMG ), XJ (CLAStructure of CLACLA ), XK (DMSStructure of DMSDMS ), XL (LMTStructure of LMTLMT ), XM (DMSStructure of DMSDMS ), YH (BCTStructure of BCTBCT ), YI (HTGStructure of HTGHTG ), YJ (CLAStructure of CLACLA ), YK (DMSStructure of DMSDMS ), YL (DMSStructure of DMSDMS ), YM (DMSStructure of DMSDMS ), ZH (LHGStructure of LHGLHG ), ZI (HTGStructure of HTGHTG ), ZJ (CLAStructure of CLACLA ), ZK (DMSStructure of DMSDMS ), ZL (RRXStructure of RRXRRX ), ZM (DMSStructure of DMSDMS )
Each chain information

Showing 3 chains with heme of 18. Show all chains

Chain GA heme  
auth_asym_id v
Residue indices (Uniprot) 1-137 (27-163)
Uniprot ID P0A386 →UniprotKB
label_asym_ids of heme LN
Available structure PDB
Chain W heme  
auth_asym_id e
Residue indices (Uniprot) 6-84 (5-84)
Uniprot ID Q8DIP0 →UniprotKB
label_asym_ids of heme VL
Available structure PDB
Chain X heme  
auth_asym_id f
Residue indices (Uniprot) 15-45 (13-45)
Uniprot ID Q8DIN9 →UniprotKB
label_asym_ids of heme VL
Available structure PDB