PDB ID:  pdb_00005iy5
  • Electron transfer complex of cytochrome c and cytochrome c oxidase at 2.0 angstrom resolution
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • Deposition date: 2016-03-24
Number of assemblies:  2
Assembly ID:  1  (author_defined_assembly)    
Structural data modeled
Oligomeric count 14
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AB (EDOStructure of EDOEDO ), BB (ZNStructure of ZNZN ), CA (CUStructure of CUCU ), CB (EDOStructure of EDOEDO ), DA (MGStructure of MGMG ), DB (CDLStructure of CDLCDL ), EA (NAStructure of NANA ), EB (CHDStructure of CHDCHD ), FB (EDOStructure of EDOEDO ), GB (EDOStructure of EDOEDO ), HA (PERStructure of PERPER ), HB (CHDStructure of CHDCHD ), IA (PGVStructure of PGVPGV ), IB (UNLStructure of UNLUNL ), JA (PGVStructure of PGVPGV ), JB (TGLStructure of TGLTGL ), KA (TGLStructure of TGLTGL ), KB (UNLStructure of UNLUNL ), LA (CUAStructure of CUACUA ), LB (DMUStructure of DMUDMU ), MA (EDOStructure of EDOEDO ), NA (CHDStructure of CHDCHD ), OA (NAStructure of NANA ), PA (PEKStructure of PEKPEK ), QA (PGVStructure of PGVPGV ), RA (PGVStructure of PGVPGV ), SA (CDLStructure of CDLCDL ), TA (CHDStructure of CHDCHD ), UA (UNLStructure of UNLUNL ), VA (UNLStructure of UNLUNL ), WA (UNLStructure of UNLUNL ), XA (EDOStructure of EDOEDO ), YA (TGLStructure of TGLTGL ), ZA (PSCStructure of PSCPSC )
Each chain information

Showing 2 chains with heme of 14. Show all chains

Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 1-514 (1-514)
Missing residues 1MET-1MET
Nonstandard amino acids Structure of FMEFME
Uniprot ID P00396 →UniprotKB
label_asym_ids of heme GA ,  FA
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain AA heme  
auth_asym_id 1
Residue indices (Uniprot) 1-104 (2-105)
Mutations (UniProt numbering)
Uniprot ID P00004 →UniprotKB
label_asym_ids of heme WC
Available structure PDB
Assembly ID:  2  (author_defined_assembly)    
Structural data modeled
Oligomeric count 14
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AC (CUAStructure of CUACUA ), BC (CHDStructure of CHDCHD ), CC (NAStructure of NANA ), DC (PEKStructure of PEKPEK ), EC (PGVStructure of PGVPGV ), FC (PGVStructure of PGVPGV ), GC (CDLStructure of CDLCDL ), HC (CHDStructure of CHDCHD ), IC (UNLStructure of UNLUNL ), JC (UNLStructure of UNLUNL ), KC (UNLStructure of UNLUNL ), LC (TGLStructure of TGLTGL ), MB (UNLStructure of UNLUNL ), MC (ZNStructure of ZNZN ), NB (CUStructure of CUCU ), NC (EDOStructure of EDOEDO ), OB (MGStructure of MGMG ), OC (CDLStructure of CDLCDL ), PB (NAStructure of NANA ), PC (UNLStructure of UNLUNL ), QC (CHDStructure of CHDCHD ), RC (PSCStructure of PSCPSC ), SB (PERStructure of PERPER ), SC (CHDStructure of CHDCHD ), TB (TGLStructure of TGLTGL ), TC (UNLStructure of UNLUNL ), UB (UNLStructure of UNLUNL ), UC (UNLStructure of UNLUNL ), VB (UNLStructure of UNLUNL ), VC (DMUStructure of DMUDMU ), WB (UNLStructure of UNLUNL ), XB (PGVStructure of PGVPGV ), YB (EDOStructure of EDOEDO ), ZB (EDOStructure of EDOEDO )
Each chain information

Showing 2 chains with heme of 14. Show all chains

Chain BA heme  
auth_asym_id 2
Residue indices (Uniprot) 1-104 (2-105)
Mutations (UniProt numbering)
Uniprot ID P00004 →UniprotKB
label_asym_ids of heme XC
Available structure PDB
Chain N heme  
auth_asym_id N
Residue indices (Uniprot) 1-514 (1-514)
Missing residues 1MET-1MET
Nonstandard amino acids Structure of FMEFME
Uniprot ID P00396 →UniprotKB
label_asym_ids of heme RB ,  QB
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å