Danish
PDB ID:  pdb_00005xth
  • Cryo-EM structure of human respiratory supercomplex I1III2IV1
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: unavailable
  • Deposition date: 2017-06-19
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data modeled
Oligomeric count 80
label_asym_ids of protein
80 chains (5 with heme) A, AA, AB, AC, B, BA, BB, BC, C, CA, CB, D, DA, DB, E, EA, EB, F, FA, FB, G, GA, GB, H, HA, HB, I, IA, IB, J, JA, JB, K, KA, KB, L, LA, LB, M, MA, MB, N, NA, NB, O, OA, OB, P, PA, PB, Q, QA, QB, R, RA, RB, S, SA, SB, T, TA, TB, U, UA, UB, V, VA, VB, W, WA, WB, X, XA, XB, Y, YA, YB, Z, ZA, ZB
label_asym_ids of heme GE ID IE JD JE RD TD UD
label_asym_ids of the others
show AD (CDL), AE (PEE), BD (CDL), BE (CDL), CC (SF4), CD (CDL), CE (FES), DC (FMN), DD (8Q1), DE (PLX), EC (SF4), ED (PLX), EE (PLX), FC (SF4), FD (PLX), FE (PEE), GC (PLX), GD (CU), HC (SF4), HD (MG), HE (CDL), IC (8Q1), JC (NDP), KC (SF4), KD (CU), KE (PEE), LC (SF4), LD (CU), LE (CDL), MC (FES), MD (ZN), ME (PEE), NC (FES), ND (CDL), OC (PLX), OD (FES), PC (CDL), PD (CDL), QC (PEE), QD (PEE), RC (PLX), SC (PEE), SD (CDL), TC (PLX), UC (PLX), VC (PLX), VD (PEE), WC (PLX), WD (CDL), XC (CDL), XD (CDL), YC (PEE), YD (PLX), ZC (PEE), ZD (CDL)
Each chain information

Showing all 80 chains (5 with heme). Show only chains with heme

Chain A  
auth_asym_id A
Residue indices (Uniprot) 27-457 (27-457)
Uniprot ID P49821 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain AA  
auth_asym_id c
Residue indices (Uniprot) 34-186 (34-186)
Uniprot ID O95169 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain AB  
auth_asym_id 4
Residue indices (Uniprot) 11-85 (12-86)
Uniprot ID P00429 ￫UniprotKB
S-S bonds 29:64
label_asym_ids of heme None
Available structure PDB
Chain AC  
auth_asym_id AW
Residue indices (Uniprot) 35-453 (35-453)
Uniprot ID P22695 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain B  
auth_asym_id B
Residue indices (Uniprot) 35-210 (35-210)
Uniprot ID O00217 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BA  
auth_asym_id d
Residue indices (Uniprot) 1-171 (1-171)
Uniprot ID O96000 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BB  
auth_asym_id 5
Residue indices (Uniprot) 1-73 (2-74)
Uniprot ID P04038 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BC  
auth_asym_id AY
Residue indices (Uniprot) 35-480 (35-480)
Uniprot ID P31930 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain C  
auth_asym_id C
Residue indices (Uniprot) 58-213 (58-213)
Uniprot ID O75251 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain CA  
auth_asym_id e
Residue indices (Uniprot) 54-150 (54-150)
Uniprot ID Q9NX14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain CB  
auth_asym_id 6
Residue indices (Uniprot) 1-56 (22-77)
Uniprot ID P07470 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id E
Residue indices (Uniprot) 16-128 (16-128)
Uniprot ID P56556 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain DA  
auth_asym_id f
Residue indices (Uniprot) 28-74 (28-74)
Uniprot ID O43677 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain DB  
auth_asym_id 7
Residue indices (Uniprot) 6-54 (30-78)
Uniprot ID P13183 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain E  
auth_asym_id F
Residue indices (Uniprot) 14-96 (14-96)
Uniprot ID O43678 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain EA  
auth_asym_id g
Residue indices (Uniprot) 1-119 (1-119)
Uniprot ID O95298 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain EB  
auth_asym_id 8
Residue indices (Uniprot) 1-47 (17-63)
Uniprot ID P00430 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain F  
auth_asym_id G
Residue indices (Uniprot) 72-156 (72-156)
Uniprot ID O14561 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain FA  
auth_asym_id h
Residue indices (Uniprot) 2-105 (2-105)
Uniprot ID O43920 ￫UniprotKB
S-S bonds 33:66,43:56
label_asym_ids of heme None
Available structure PDB
Chain FB  
auth_asym_id 9
Residue indices (Uniprot) 1-43 (25-67)
Uniprot ID P10175 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id H
Residue indices (Uniprot) 5-116 (5-116)
Uniprot ID Q16718 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain GA  
auth_asym_id i
Residue indices (Uniprot) 1-347 (1-347)
Mutations (UniProt numbering) S152N
Uniprot ID P03891 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain GB  
auth_asym_id AA
Residue indices (Uniprot) 2-82 (2-82)
Uniprot ID O14949 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id I
Residue indices (Uniprot) 4-113 (4-113)
Missing residues 75ALA-89ALA
Structural gaps Exists
Uniprot ID O95182 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.15 Å
Chain HA  
auth_asym_id j
Residue indices (Uniprot) 1-115 (1-115)
Uniprot ID B9EE38 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain HB  
auth_asym_id AB
Residue indices (Uniprot) 1-57 (1-57)
Uniprot ID P47985 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id J
Residue indices (Uniprot) 40-376 (40-376)
Uniprot ID Q16795 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain IA  
auth_asym_id k
Residue indices (Uniprot) 1-97 (1-97)
Uniprot ID V9JN72 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain IB  
auth_asym_id AC
Residue indices (Uniprot) 79-274 (79-274)
Uniprot ID P47985 ￫UniprotKB
S-S bonds 222:238
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id K
Residue indices (Uniprot) 74-106 (74-106)
Uniprot ID P56181 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain JA  
auth_asym_id l
Residue indices (Uniprot) 1-603 (1-603)
Mutations (UniProt numbering) T8A, S270N, T533M
Uniprot ID P03915 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain JB  
auth_asym_id AD
Residue indices (Uniprot) 2-63 (2-63)
Uniprot ID Q9UDW1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id L
Residue indices (Uniprot) 58-175 (58-175)
Uniprot ID O43181 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain KA  
auth_asym_id m
Residue indices (Uniprot) 1-174 (1-174)
Uniprot ID Q8HAX7 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain KB  
auth_asym_id AE
Residue indices (Uniprot) 18-91 (18-91)
Uniprot ID P07919 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id M
Residue indices (Uniprot) 30-716 (30-716)
Uniprot ID P28331 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain LA  
auth_asym_id n
Residue indices (Uniprot) 3-58 (3-58)
Uniprot ID O75438 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain LB  
auth_asym_id AF
Residue indices (Uniprot) 6-111 (6-111)
Uniprot ID P14927 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain M  
auth_asym_id N
Residue indices (Uniprot) 2-144 (2-144)
Uniprot ID Q9UI09 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain MA  
auth_asym_id o
Residue indices (Uniprot) 2-129 (2-129)
Uniprot ID O95168 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain MB  
auth_asym_id AG
Residue indices (Uniprot) 2-52 (2-52)
Uniprot ID O14957 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain N  
auth_asym_id O
Residue indices (Uniprot) 36-247 (36-247)
Uniprot ID P19404 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain NA  
auth_asym_id p
Residue indices (Uniprot) 8-179 (8-179)
Uniprot ID Q9Y6M9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain NB heme  
auth_asym_id AH
Residue indices (Uniprot) 85-325 (85-325)
Uniprot ID P08574 ￫UniprotKB
label_asym_ids of heme RD
Available structure PDB
Chain O  
auth_asym_id P
Residue indices (Uniprot) 43-250 (43-250)
Uniprot ID O75489 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain OA  
auth_asym_id r
Residue indices (Uniprot) 1-459 (1-459)
Mutations (UniProt numbering) P54L, S101F
Uniprot ID P03905 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain OB heme  
auth_asym_id AJ
Residue indices (Uniprot) 2-379 (2-379)
Uniprot ID P00156 ￫UniprotKB
label_asym_ids of heme TD ,  UD
Available structure PDB
Chain P  
auth_asym_id Q
Residue indices (Uniprot) 34-463 (34-463)
Uniprot ID O75306 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain PA  
auth_asym_id s
Residue indices (Uniprot) 1-318 (1-318)
Uniprot ID H9PGF0 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain PB  
auth_asym_id AK
Residue indices (Uniprot) 35-453 (35-453)
Uniprot ID P22695 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id S
Residue indices (Uniprot) 1-70 (1-70)
Uniprot ID O15239 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain QA  
auth_asym_id u
Residue indices (Uniprot) 4-172 (4-172)
Uniprot ID P51970 ￫UniprotKB
S-S bonds 78:110
label_asym_ids of heme None
Available structure PDB
Chain QB  
auth_asym_id AL
Residue indices (Uniprot) 35-480 (35-480)
Uniprot ID P31930 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain R  
auth_asym_id T
Residue indices (Uniprot) 29-123 (29-123)
Uniprot ID O75380 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain RA  
auth_asym_id v
Residue indices (Uniprot) 3-124 (3-124)
Missing residues 24THR-34ARG
Structural gaps Exists
Uniprot ID P17568 ￫UniprotKB
S-S bonds 69:80
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.19 Å
Chain RB  
auth_asym_id AN
Residue indices (Uniprot) 2-82 (2-82)
Uniprot ID O14949 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id U
Residue indices (Uniprot) 2-84 (2-84)
Uniprot ID O95167 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain SA  
auth_asym_id w
Residue indices (Uniprot) 36-355 (36-355)
Uniprot ID O95299 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain SB  
auth_asym_id AO
Residue indices (Uniprot) 1-57 (1-57)
Uniprot ID P47985 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id V
Residue indices (Uniprot) 2-141 (2-141)
Uniprot ID Q86Y39 ￫UniprotKB
S-S bonds 95:115
label_asym_ids of heme None
Available structure PDB
Chain TA heme  
auth_asym_id x
Residue indices (Uniprot) 1-514 (1-514)
Uniprot ID P00396 ￫UniprotKB
label_asym_ids of heme ID ,  JD
Available structure PDB
Chain TB  
auth_asym_id AP
Residue indices (Uniprot) 79-274 (79-274)
Uniprot ID P47985 ￫UniprotKB
S-S bonds 222:238
label_asym_ids of heme None
Available structure PDB
Chain U  
auth_asym_id W
Residue indices (Uniprot) 7-144 (7-144)
Uniprot ID Q9P0J0 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain UA  
auth_asym_id y
Residue indices (Uniprot) 1-227 (1-227)
Uniprot ID P68530 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain UB  
auth_asym_id AQ
Residue indices (Uniprot) 2-63 (2-63)
Uniprot ID Q9UDW1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain V  
auth_asym_id X
Residue indices (Uniprot) 72-156 (72-156)
Uniprot ID O14561 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain VA  
auth_asym_id z
Residue indices (Uniprot) 1-261 (1-261)
Uniprot ID P00415 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain VB  
auth_asym_id AR
Residue indices (Uniprot) 18-91 (18-91)
Uniprot ID P07919 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain W  
auth_asym_id Y
Residue indices (Uniprot) 39-97 (39-97)
Uniprot ID O95178 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain WA  
auth_asym_id 0
Residue indices (Uniprot) 4-147 (26-169)
Uniprot ID P00423 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain WB  
auth_asym_id AS
Residue indices (Uniprot) 6-111 (6-111)
Uniprot ID P14927 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain X  
auth_asym_id Z
Residue indices (Uniprot) 10-89 (10-89)
Uniprot ID O43676 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain XA  
auth_asym_id 1
Residue indices (Uniprot) 1-109 (44-152)
Uniprot ID P00426 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain XB  
auth_asym_id AT
Residue indices (Uniprot) 2-52 (2-52)
Uniprot ID O14957 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Y  
auth_asym_id a
Residue indices (Uniprot) 52-189 (52-189)
Uniprot ID O43674 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain YA  
auth_asym_id 2
Residue indices (Uniprot) 1-98 (32-129)
Uniprot ID P00428 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain YB heme  
auth_asym_id AU
Residue indices (Uniprot) 85-325 (85-325)
Uniprot ID P08574 ￫UniprotKB
label_asym_ids of heme GE
Available structure PDB
Chain Z  
auth_asym_id b
Residue indices (Uniprot) 3-126 (3-126)
Uniprot ID O95139 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain ZA  
auth_asym_id 3
Residue indices (Uniprot) 1-84 (13-96)
Uniprot ID P07471 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain ZB heme  
auth_asym_id AV
Residue indices (Uniprot) 2-379 (2-379)
Uniprot ID P00156 ￫UniprotKB
label_asym_ids of heme IE ,  JE
Available structure PDB