Danish
PDB ID:  pdb_00006et5
  • Reaction centre light harvesting complex 1 from Blc. virids
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: 2.87 Å
  • Deposition date: 2017-10-25
Number of assemblies:  1
Assembly ID:  0  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 54
label_asym_ids of protein
54 chains (1 with heme) A, AA, AB, B, BA, BB, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, OA, P, PA, Q, QA, R, RA, S, SA, T, TA, U, UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA
label_asym_ids of heme CB DB EB FB
label_asym_ids of the others
show AC (BCB), AD (NS0), BC (NS0), BD (BCB), CC (BCB), CD (NS0), DC (BCB), DD (BCB), EC (BCB), ED (NS0), FC (BCB), FD (BCB), GB (BCB), GC (BCB), GD (NS0), HB (BCB), HC (BCB), HD (BCB), IB (BPB), IC (BCB), ID (NS0), JB (UQ9), JC (BCB), JD (BCB), KB (FE), KC (BCB), KD (NS0), LB (SO4), LC (BCB), LD (BCB), MB (SO4), MC (BCB), MD (NS0), NB (SO4), NC (BCB), ND (BCB), OB (SO4), OC (BCB), OD (NS0), PB (BCB), PC (BCB), PD (BCB), QB (BCB), QC (BCB), QD (NS0), RB (BPB), RC (UQ9), RD (BCB), SB (LDA), SC (BCB), SD (NS0), TB (MQ9), TC (BCB), TD (BCB), UB (NS5), UC (NS0), UD (NS0), VB (LDA), VC (BCB), VD (BCB), WB (SO4), WC (NS0), WD (NS0), XB (SO4), XC (BCB), XD (BCB), YB (SO4), YC (NS0), YD (NS0), ZB (BCB), ZC (BCB)
Each chain information

Showing all 54 chains (1 with heme). Show only chains with heme

Chain A heme  
auth_asym_id C
Residue indices (Uniprot) 1-332 (21-353)
Uniprot ID P07173 ￫UniprotKB
label_asym_ids of heme CB ,  DB ,  EB ,  FB
Available structure PDB
Chain AA  
auth_asym_id T
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain AB  
auth_asym_id y
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain B  
auth_asym_id L
Residue indices (Uniprot) 1-273 (1-274)
Uniprot ID P06009 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BA  
auth_asym_id W
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BB  
auth_asym_id 5
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain C  
auth_asym_id M
Residue indices (Uniprot) 1-323 (2-324)
Uniprot ID P06010 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain CA  
auth_asym_id Z
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id H
Residue indices (Uniprot) 1-258 (1-258)
Missing residues 1MET-1MET
Structural gaps Exists
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID P06008 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain DA  
auth_asym_id c
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain E  
auth_asym_id z
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain EA  
auth_asym_id f
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain F  
auth_asym_id 1
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain FA  
auth_asym_id i
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id 2
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain GA  
auth_asym_id l
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id F
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain HA  
auth_asym_id o
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id K
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain IA  
auth_asym_id r
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id P
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain JA  
auth_asym_id u
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id S
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain KA  
auth_asym_id x
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id V
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain LA  
auth_asym_id 4
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain M  
auth_asym_id Y
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain MA  
auth_asym_id 7
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain N  
auth_asym_id b
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain NA  
auth_asym_id I
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain O  
auth_asym_id e
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain OA  
auth_asym_id O
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain P  
auth_asym_id h
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain PA  
auth_asym_id R
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id k
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain QA  
auth_asym_id U
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain R  
auth_asym_id n
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain RA  
auth_asym_id X
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id q
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain SA  
auth_asym_id a
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id t
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain TA  
auth_asym_id d
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain U  
auth_asym_id w
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain UA  
auth_asym_id g
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain V  
auth_asym_id 3
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain VA  
auth_asym_id j
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain W  
auth_asym_id 6
Residue indices (Uniprot) 1-58 (1-59)
Uniprot ID P04123 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain WA  
auth_asym_id m
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain X  
auth_asym_id G
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain XA  
auth_asym_id p
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Y  
auth_asym_id N
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain YA  
auth_asym_id s
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Z  
auth_asym_id Q
Residue indices (Uniprot) 1-55 (1-56)
Uniprot ID P04124 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain ZA  
auth_asym_id v
Residue indices (Uniprot) 13-36 (13-36)
Uniprot ID P04126 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB