Danish
PDB ID:  pdb_00006koc
  • X-ray Structure of the proton-pumping cytochrome aa3-600 menaquinol oxidase from Bacillus subtilis complexed with 3-iodo-N-oxo-2-heptyl-4-hydroxyquinoline
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 3.8 Å
  • Deposition date: 2019-08-09
Number of assemblies:  2
Assembly ID:  1  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others K (CUStructure of CUCU ), L (IHQStructure of IHQIHQ )
Each chain information

Showing all 4 chains (1 with heme). Show only chains with heme

Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 14-633 (1-649)
Missing residues 517PHE-529TRP
Structural gaps Exists
Uniprot ID P34956 ￫UniprotKB
label_asym_ids of heme J ,  I
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain B  
auth_asym_id B
Residue indices (Uniprot) 16-288 (26-321)
Missing residues 51GLY-64ASN:218ASN-220ALA
Structural gaps Exists
Uniprot ID P34957 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.16 Å
Chain C  
auth_asym_id C
Residue indices (Uniprot) 20-197 (1-204)
Uniprot ID P34958 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id D
Residue indices (Uniprot) 0-95 (48-124)
Mutations (UniProt numbering)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID P34959 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Assembly ID:  2  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others O (CUStructure of CUCU ), P (IHQStructure of IHQIHQ )
Each chain information

Showing all 4 chains (1 with heme). Show only chains with heme

Chain E  
auth_asym_id G
Residue indices (Uniprot) 20-197 (1-204)
Uniprot ID P34958 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain F  
auth_asym_id H
Residue indices (Uniprot) 0-95 (48-124)
Mutations (UniProt numbering)
Nonstandard amino acids Structure of UNKUNK
Unknown residues Included
Uniprot ID P34959 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id F
Residue indices (Uniprot) 16-288 (26-321)
Missing residues 51GLY-64ASN:218ASN-220ALA
Structural gaps Exists
Uniprot ID P34957 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain H heme  
auth_asym_id E
Residue indices (Uniprot) 14-633 (1-649)
Missing residues 517PHE-529TRP
Structural gaps Exists
Uniprot ID P34956 ￫UniprotKB
label_asym_ids of heme N ,  M
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.16 Å