PDB ID: pdb_00007dxh
- Cryo-EM structure of PSII intermediate Psb28-PSII complex
- Experimental method: ELECTRON MICROSCOPY
- Resolution: unavailable
- Deposition date: 2021-01-18
Number of assemblies: 1
| Structural data | modeled |
|---|---|
| Oligomeric count | 18 |
| label_asym_ids of protein | |
| label_asym_ids of heme | |
| label_asym_ids of the others |
AA (CLA  CLA
), AB (CLACLA
), AC (CLACLA
), BA (CLACLA
), BB (PQ9 PQ9
), BC (CLACLA
), CA (CLACLA
), CB (BCR BCR
), CC (CLACLA
), DA (CLACLA
), DB (MGE MGE
), DC (BCRBCR
), EA (CLACLA
), EB (UNL UNL
), EC (BCRBCR
), FA (CLACLA
), FB (UNLUNL
), FC (DGD DGD
), GA (CLACLA
), GC (DGDDGD
), HA (CLACLA
), HB (MGEMGE
), HC (CLACLA
), IA (CLACLA
), IB (CLACLA
), IC (BCRBCR
), JA (CLACLA
), JB (HTG HTG
), KA (CLACLA
), KB (BCRBCR
), LA (CLACLA
), LB (DGDDGD
), MA (CLACLA
), MB (SQD SQD
), NA (CLACLA
), NB (LMT LMT
), OA (CLACLA
), OB (MGEMGE
), PA (BCRBCR
), PB (LMTLMT
), QA (BCRBCR
), QB (CL CL
), RA (BCRBCR
), RB (MGEMGE
), S (MGEMGE
), SA (MGEMGE
), SB (CLACLA
), T (SQDSQD
), TA (MGEMGE
), TB (CLACLA
), U (CLACLA
), UA (PHO PHO
), UB (CLACLA
), V (CLACLA
), VA (CLACLA
), VB (CLACLA
), W (BCRBCR
), WA (PHOPHO
), WB (CLACLA
), X (CLCL
), XA (LMTLMT
), XB (CLACLA
), Y (DGDDGD
), YA (FE2 FE2
), YB (CLACLA
), Z (CLACLA
), ZA (CLACLA
), ZB (CLACLA
)
|
Each chain information
Showing all 18 chains (2 with heme). Show only chains with heme
| auth_asym_id | A |
|---|---|
| Residue indices (Uniprot) | 5-113 (1-116) |
| Uniprot ID | Q8DLJ8 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | B |
|---|---|
| Residue indices (Uniprot) | 9-56 (1-56) |
| Uniprot ID | Q8DMP8 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | a |
|---|---|
| Residue indices (Uniprot) | 12-333 (1-360) |
| Missing residues | 231GLU-246TYR:259ILE-267ASN |
| Structural gaps | Exists |
| Uniprot ID | P51765 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB and Modeled |
| RMSD of experimental residues after energy minimization | 0.13 Å |
| auth_asym_id | b |
|---|---|
| Residue indices (Uniprot) | 2-495 (1-505) |
| Uniprot ID | D0VWR1 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | d |
|---|---|
| Residue indices (Uniprot) | 13-351 (1-342) |
| Uniprot ID | D0VWR8 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | e |
|---|---|
| Residue indices (Uniprot) | 21-83 (1-84) |
| Uniprot ID | P12238 ￫UniprotKB |
| label_asym_ids of heme | GB |
| Available structure | PDB |
| auth_asym_id | f |
|---|---|
| Residue indices (Uniprot) | 17-44 (1-45) |
| Uniprot ID | P12239 ￫UniprotKB |
| label_asym_ids of heme | GB |
| Available structure | PDB |
| auth_asym_id | h |
|---|---|
| Residue indices (Uniprot) | 2-63 (1-65) |
| Uniprot ID | P19052 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | i |
|---|---|
| Residue indices (Uniprot) | 1-29 (1-38) |
| Uniprot ID | P12240 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | l |
|---|---|
| Residue indices (Uniprot) | 1-37 (1-37) |
| Uniprot ID | P12241 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | m |
|---|---|
| Residue indices (Uniprot) | 3-33 (1-36) |
| Uniprot ID | P12312 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | t |
|---|---|
| Residue indices (Uniprot) | 1-27 (1-32) |
| Uniprot ID | P12313 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | x |
|---|---|
| Residue indices (Uniprot) | 2-37 (1-40) |
| Uniprot ID | D0VWR4 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | c |
|---|---|
| Residue indices (Uniprot) | 28-451 (1-451) |
| Missing residues | 326ALA-336GLY:409GLY-418ASN |
| Structural gaps | Exists |
| Uniprot ID | D0VWR7 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB and Modeled |
| RMSD of experimental residues after energy minimization | 0.16 Å |
| auth_asym_id | k |
|---|---|
| Residue indices (Uniprot) | 12-45 (1-46) |
| Uniprot ID | Q9F1K9 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | z |
|---|---|
| Residue indices (Uniprot) | 1-62 (1-62) |
| Uniprot ID | D0VWR5 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | y |
|---|---|
| Residue indices (Uniprot) | 1-28 (1-30) |
| Uniprot ID | D0VWR3 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | C |
|---|---|
| Residue indices (Uniprot) | 29-51 (-) |
| Uniprot ID | Unavailable |
| label_asym_ids of heme | None |
| Available structure | PDB |