PDB ID:  pdb_00007p46
  • Crystal Structure of Xanthomonas campestris Tryptophan 2,3-dioxygenase (TDO)
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • Deposition date: 2021-07-09
Number of assemblies:  2
Assembly ID:  1  (author_and_software_defined_assembly)    
Structural data PDB
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (KYNStructure of KYNKYN ), BA (TRPStructure of TRPTRP ), CA (GOLStructure of GOLGOL ), DA (GOLStructure of GOLGOL ), FA (CYNStructure of CYNCYN ), GA (KYNStructure of KYNKYN ), HA (TRPStructure of TRPTRP ), J (CYNStructure of CYNCYN ), K (KYNStructure of KYNKYN ), L (TRPStructure of TRPTRP ), M (GOLStructure of GOLGOL ), N (GOLStructure of GOLGOL ), O (GOLStructure of GOLGOL ), P (GOLStructure of GOLGOL ), Q (GOLStructure of GOLGOL ), R (GOLStructure of GOLGOL ), T (CYNStructure of CYNCYN ), U (KYNStructure of KYNKYN ), V (TRPStructure of TRPTRP ), W (GOLStructure of GOLGOL ), X (GOLStructure of GOLGOL ), Z (CYNStructure of CYNCYN )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 5-285 (5-286)
Mutations (UniProt numbering)
Uniprot ID Q8PDA8 →UniprotKB
label_asym_ids of heme I
Available structure PDB
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 6-286 (5-286)
Mutations (UniProt numbering)
Uniprot ID Q8PDA8 →UniprotKB
label_asym_ids of heme S
Available structure PDB
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 6-284 (5-286)
Mutations (UniProt numbering)
Uniprot ID Q8PDA8 →UniprotKB
label_asym_ids of heme Y
Available structure PDB
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 6-285 (5-286)
Mutations (UniProt numbering)
Uniprot ID Q8PDA8 →UniprotKB
label_asym_ids of heme EA
Available structure PDB
Assembly ID:  2  (author_and_software_defined_assembly)    
Structural data PDB
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others JA (KYNStructure of KYNKYN ), KA (TRPStructure of TRPTRP ), MA (CYNStructure of CYNCYN ), NA (KYNStructure of KYNKYN ), OA (TRPStructure of TRPTRP ), PA (GOLStructure of GOLGOL ), RA (KYNStructure of KYNKYN ), SA (TRPStructure of TRPTRP ), UA (CYNStructure of CYNCYN ), VA (KYNStructure of KYNKYN ), WA (TRPStructure of TRPTRP ), XA (GOLStructure of GOLGOL ), YA (GOLStructure of GOLGOL ), ZA (GOLStructure of GOLGOL )
Each chain information
Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 6-283 (5-286)
Mutations (UniProt numbering)
Uniprot ID Q8PDA8 →UniprotKB
label_asym_ids of heme IA
Available structure PDB
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 5-283 (5-286)
Mutations (UniProt numbering)
Uniprot ID Q8PDA8 →UniprotKB
label_asym_ids of heme LA
Available structure PDB
Chain G heme  
auth_asym_id G
Residue indices (Uniprot) 6-282 (5-286)
Mutations (UniProt numbering)
Uniprot ID Q8PDA8 →UniprotKB
label_asym_ids of heme QA
Available structure PDB
Chain H heme  
auth_asym_id H
Residue indices (Uniprot) 5-284 (5-286)
Mutations (UniProt numbering)
Uniprot ID Q8PDA8 →UniprotKB
label_asym_ids of heme TA
Available structure PDB