Danish

PDB ID: pdb_00007ymi

PSII-Pcb Dimer of Acaryochloris Marina
Experimental method: ELECTRON MICROSCOPY
Resolution: unavailable
Deposition date: 2022-07-28

Number of assemblies: 1

Assembly ID: 0 (author_defined_assembly)
Structural data	including_not_modeled
Oligomeric count	40
label_asym_ids of protein	40 chains (4 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, P, Q, R, S, T, U, V, W, X, Y, Z
label_asym_ids of heme	ZC ZI
label_asym_ids of the others	show AB (CL7), AC (CL7), AD (8CT), AE (LMG), AF (CL7), AG (CL7), AH (CL7), AI (CL7), AJ (8CT), AK (CL7), AL (CL7), AM (CL7), BB (CL7), BC (CL7), BD (CL7), BE (CL7), BF (CL7), BG (CL7), BH (CL7), BI (CL7), BJ (CL7), BK (CL7), BL (CL7), BM (CL7), CB (CL7), CC (CL7), CD (CL7), CE (CL7), CF (CL7), CG (CL7), CH (CL7), CI (CL7), CJ (CL7), CK (CL7), CL (CL7), CM (CL7), DB (CL7), DC (CL7), DD (CL7), DE (CL7), DF (CL7), DG (CL7), DH (CL7), DI (CL7), DJ (CL7), DK (CL7), DL (CL7), DM (CL7), EB (CL7), EC (CL7), ED (CL7), EE (CL7), EF (CL7), EG (CL7), EH (CL7), EI (CL7), EJ (CL7), EK (CL7), EL (CL7), EM (CL7), FB (CL7), FC (CL7), FD (CL7), FE (CL7), FF (CL7), FG (CL7), FH (CL7), FI (CL7), FJ (CL7), FK (CL7), FL (CL7), FM (CL7), GB (CL7), GC (CL7), GD (CL7), GE (CL7), GF (CL7), GG (CL7), GH (CL7), GI (CL7), GJ (CL7), GK (CL7), GL (CL7), GM (CL7), HB (CL7), HC (CL7), HD (CL7), HE (CL7), HF (CL7), HG (CL7), HH (CL7), HI (CL7), HJ (CL7), HK (CL7), HL (CL7), HM (CL7), IB (CL7), IC (CL7), ID (CL7), IE (CL7), IF (CL7), IG (CL7), IH (CL7), II (CL7), IJ (CL7), IK (CL7), IL (CL7), IM (CL7), JB (CL7), JC (CL7), JD (CL7), JE (CL7), JF (CL7), JG (CL7), JH (CL7), JI (CL7), JJ (CL7), JK (CL7), JL (CL7), JM (CL7), KB (CL7), KC (8CT), KD (CL7), KE (CL7), KF (CL7), KG (CL7), KH (CL7), KI (8CT), KJ (CL7), KK (CL7), KL (CL7), KM (CL7), LB (8CT), LC (8CT), LD (CL7), LE (CL7), LF (CL7), LG (CL7), LH (CL7), LI (8CT), LJ (CL7), LK (CL7), LL (CL7), LM (ZEX), MB (8CT), MC (DGD), MD (CL7), ME (CL7), MF (CL7), MG (CL7), MH (CL7), MI (DGD), MJ (CL7), MK (CL7), ML (CL7), MM (ZEX), NB (8CT), NC (CL7), ND (CL7), NE (CL7), NF (CL7), NG (ZEX), NH (8CT), NI (CL7), NJ (CL7), NK (CL7), NL (CL7), NM (ZEX), OA (CL7), OB (SQD), OC (8CT), OD (CL7), OE (CL7), OF (CL7), OG (ZEX), OH (8CT), OI (8CT), OJ (CL7), OK (CL7), OL (ZEX), PA (PHO), PB (LMG), PC (FE2), PD (CL7), PE (CL7), PF (ZEX), PG (ZEX), PH (8CT), PI (FE2), PJ (CL7), PK (CL7), PL (ZEX), QA (CL7), QB (CL7), QC (CL7), QD (CL7), QE (CL7), QF (ZEX), QG (CL7), QH (SQD), QI (CL7), QJ (CL7), QK (CL7), QL (SQD), RA (8CT), RB (LHG), RC (BCT), RD (CL7), RE (CL7), RF (SQD), RG (PHO), RH (LMG), RI (BCT), RJ (CL7), RK (CL7), RL (ZEX), SA (SQD), SB (DGD), SC (CL7), SD (CL7), SE (CL7), SF (ZEX), SG (CL7), SH (CL7), SI (CL7), SJ (CL7), SK (CL7), SL (SQD), TA (CL7), TB (LHG), TC (CL7), TD (ZEX), TE (CL7), TF (SQD), TG (8CT), TH (LHG), TI (CL7), TJ (ZEX), TK (ZEX), TL (LHG), UA (LHG), UB (SQD), UC (8CT), UD (ZEX), UE (ZEX), UF (LHG), UG (CL7), UH (DGD), UI (8CT), UJ (ZEX), UK (ZEX), UL (LHG), VA (CL7), VB (8CT), VC (PL9), VD (ZEX), VE (ZEX), VF (ZEX), VG (LHG), VH (LHG), VI (PL9), VJ (SQD), VK (SQD), VL (8CT), WA (CL7), WB (LMG), WC (PHO), WD (SQD), WE (SQD), WF (LHG), WG (8CT), WH (LMG), WI (PHO), WJ (ZEX), WK (CL7), WL (ZEX), XA (CL7), XB (CL7), XC (LHG), XD (ZEX), XE (CL7), XF (8CT), XG (CL7), XH (CL7), XI (LHG), XJ (SQD), XK (CL7), XL (CL7), YA (CL7), YB (CL7), YC (LMG), YD (SQD), YE (CL7), YF (ZEX), YG (CL7), YH (CL7), YI (LMG), YJ (ZEX), YK (CL7), YL (CL7), ZA (CL7), ZB (CL7), ZD (ZEX), ZE (CL7), ZF (CL7), ZG (CL7), ZH (CL7), ZJ (LMG), ZK (CL7), ZL (CL7)

Each chain information

Showing all 40 chains (4 with heme). Show only chains with heme

Chain A
auth_asym_id	A
Residue indices (Uniprot)	11-336 (1-360)
Structural gaps	Exists
Uniprot ID	A5A8K9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain AA
auth_asym_id	h
Residue indices (Uniprot)	2-69 (1-71)
Uniprot ID	B0CDZ2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain B
auth_asym_id	B
Residue indices (Uniprot)	2-480 (1-506)
Uniprot ID	B0CFM2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain BA
auth_asym_id	i
Residue indices (Uniprot)	1-34 (1-34)
Uniprot ID	B0C5R5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain C
auth_asym_id	C
Residue indices (Uniprot)	35-485 (1-490)
Missing residues	338ALA-351LYS:413LEU-429VAL
Structural gaps	Exists
Uniprot ID	B0C1V7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.17 Å

Chain CA
auth_asym_id	k
Residue indices (Uniprot)	9-45 (1-45)
Uniprot ID	B0C6Z7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain D
auth_asym_id	D
Residue indices (Uniprot)	11-349 (1-351)
Missing residues	225GLY-240GLU
Structural gaps	Exists
Uniprot ID	B0C1V6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.13 Å

Chain DA
auth_asym_id	l
Residue indices (Uniprot)	3-38 (1-38)
Uniprot ID	B0C6T1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain E heme
auth_asym_id	E
Residue indices (Uniprot)	16-80 (1-83)
Uniprot ID	B0C6T2 ￫UniprotKB
label_asym_ids of heme	ZC
Available structure	PDB

Chain EA
auth_asym_id	m
Residue indices (Uniprot)	3-33 (1-34)
Uniprot ID	B0CFM0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain F heme
auth_asym_id	F
Residue indices (Uniprot)	17-46 (1-99)
Uniprot ID	B0C2V2 ￫UniprotKB
label_asym_ids of heme	ZC
Available structure	PDB

Chain FA
auth_asym_id	t
Residue indices (Uniprot)	1-28 (1-46)
Uniprot ID	B0C605 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain G
auth_asym_id	H
Residue indices (Uniprot)	2-69 (1-71)
Uniprot ID	B0CDZ2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain GA
auth_asym_id	x
Residue indices (Uniprot)	2-36 (1-40)
Uniprot ID	B0BYW9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain H
auth_asym_id	I
Residue indices (Uniprot)	1-34 (1-34)
Uniprot ID	B0C5R5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain HA
auth_asym_id	y
Residue indices (Uniprot)	13-35 (1-39)
Uniprot ID	A0AAJ6N611 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain I
auth_asym_id	K
Residue indices (Uniprot)	9-45 (1-45)
Uniprot ID	B0C6Z7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain IA
auth_asym_id	z
Residue indices (Uniprot)	1-59 (1-62)
Uniprot ID	B0C0S7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain J
auth_asym_id	L
Residue indices (Uniprot)	3-38 (1-38)
Uniprot ID	B0C6T1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain JA
auth_asym_id	6
Residue indices (Uniprot)	1-349 (1-352)
Uniprot ID	B0C3E5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain K
auth_asym_id	M
Residue indices (Uniprot)	3-33 (1-34)
Uniprot ID	B0CFM0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain KA
auth_asym_id	g
Residue indices (Uniprot)	1-41 (-)
Nonstandard amino acids	UNK
Unknown residues	Included
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain L
auth_asym_id	T
Residue indices (Uniprot)	1-28 (1-46)
Uniprot ID	B0C605 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain LA
auth_asym_id	5
Residue indices (Uniprot)	10-351 (1-356)
Missing residues	122ASP-127ASN:180ALA-186ILE
Structural gaps	Exists
Uniprot ID	B0C576 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.11 Å

Chain M
auth_asym_id	X
Residue indices (Uniprot)	2-36 (1-40)
Uniprot ID	B0BYW9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain MA
auth_asym_id	7
Residue indices (Uniprot)	1-344 (1-349)
Uniprot ID	B0C6I0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain N
auth_asym_id	Y
Residue indices (Uniprot)	13-35 (1-39)
Uniprot ID	A0AAJ6N611 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain NA
auth_asym_id	8
Residue indices (Uniprot)	21-351 (1-353)
Uniprot ID	B0C3E6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain O
auth_asym_id	Z
Residue indices (Uniprot)	1-59 (1-62)
Uniprot ID	B0C0S7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain P
auth_asym_id	2
Residue indices (Uniprot)	1-349 (1-352)
Uniprot ID	B0C3E5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Q
auth_asym_id	G
Residue indices (Uniprot)	1-41 (-)
Nonstandard amino acids	UNK
Unknown residues	Included
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain R
auth_asym_id	1
Residue indices (Uniprot)	10-351 (1-356)
Missing residues	122ASP-127ASN:180ALA-186ILE
Structural gaps	Exists
Uniprot ID	B0C576 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.11 Å

Chain S
auth_asym_id	3
Residue indices (Uniprot)	1-344 (1-349)
Uniprot ID	B0C6I0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain T
auth_asym_id	4
Residue indices (Uniprot)	21-351 (1-353)
Uniprot ID	B0C3E6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain U
auth_asym_id	a
Residue indices (Uniprot)	11-336 (1-360)
Structural gaps	Exists
Uniprot ID	A5A8K9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain V
auth_asym_id	b
Residue indices (Uniprot)	2-480 (1-506)
Uniprot ID	B0CFM2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain W
auth_asym_id	c
Residue indices (Uniprot)	35-485 (1-490)
Missing residues	338ALA-351LYS:413LEU-429VAL
Structural gaps	Exists
Uniprot ID	B0C1V7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.13 Å

Chain X
auth_asym_id	d
Residue indices (Uniprot)	11-349 (1-351)
Missing residues	225GLY-240GLU
Structural gaps	Exists
Uniprot ID	B0C1V6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.16 Å

Chain Y heme
auth_asym_id	e
Residue indices (Uniprot)	16-80 (1-83)
Uniprot ID	B0C6T2 ￫UniprotKB
label_asym_ids of heme	ZI
Available structure	PDB

Chain Z heme
auth_asym_id	f
Residue indices (Uniprot)	17-46 (1-99)
Uniprot ID	B0C2V2 ￫UniprotKB
label_asym_ids of heme	ZI
Available structure	PDB