Danish
PDB ID:  pdb_00007z53
  • Structure of native leukocyte myeloperoxidase in complex with a truncated version (SPIN truncated) of the Staphyloccal Peroxidase Inhibitor SPIN from Staphylococcus aureus
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2.28 Å
  • Deposition date: 2022-03-07
Number of assemblies:  4
Assembly ID:  1  (author_defined_assembly)    
Structural data modeled
Oligomeric count 6
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (NAGStructure of NAGNAG , BMAStructure of BMABMA , MANStructure of MANMAN , FUCStructure of FUCFUC ), AB (CAStructure of CACA ), BA (NAGStructure of NAGNAG ), BB (NAGStructure of NAGNAG ), CA (NAGStructure of NAGNAG , BMAStructure of BMABMA , MANStructure of MANMAN , FUCStructure of FUCFUC ), CB (NAGStructure of NAGNAG ), DB (ACTStructure of ACTACT ), UA (CLStructure of CLCL ), WA (CAStructure of CACA ), XA (EDOStructure of EDOEDO ), Y (NAGStructure of NAGNAG , BMAStructure of BMABMA ), YA (CLStructure of CLCL ), Z (NAGStructure of NAGNAG , BMAStructure of BMABMA , MANStructure of MANMAN )
Each chain information

Showing 2 chains with heme of 6. Show all chains

Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 279-743 (279-744)
Missing residues 316CYS-316CYS
Nonstandard amino acids Structure of CSOCSO
Uniprot ID P05164 ￫UniprotKB
S-S bonds 281:291,285:309,387:398,606:663,704:730
label_asym_ids of heme VA
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 279-743 (279-744)
Missing residues 316CYS-316CYS
Nonstandard amino acids Structure of CSOCSO
Uniprot ID P05164 ￫UniprotKB
S-S bonds 281:291,285:309,387:398,606:663,704:730
label_asym_ids of heme ZA
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Assembly ID:  2  (author_defined_assembly)    
Structural data modeled
Oligomeric count 6
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others DA (NAGStructure of NAGNAG ), EA (NAGStructure of NAGNAG , BMAStructure of BMABMA , MANStructure of MANMAN , FUCStructure of FUCFUC ), EB (CLStructure of CLCL ), FA (NAGStructure of NAGNAG , BMAStructure of BMABMA ), GA (NAGStructure of NAGNAG ), GB (CAStructure of CACA ), HA (NAGStructure of NAGNAG , BMAStructure of BMABMA , MANStructure of MANMAN , FUCStructure of FUCFUC ), HB (NAGStructure of NAGNAG ), IB (CLStructure of CLCL ), KB (CAStructure of CACA )
Each chain information

Showing 2 chains with heme of 6. Show all chains

Chain H heme  
auth_asym_id H
Residue indices (Uniprot) 279-744 (279-744)
Missing residues 316CYS-316CYS
Nonstandard amino acids Structure of CSOCSO
Uniprot ID P05164 ￫UniprotKB
S-S bonds 281:291,285:309,387:398,606:663,704:730
label_asym_ids of heme FB
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain J heme  
auth_asym_id J
Residue indices (Uniprot) 279-743 (279-744)
Missing residues 316CYS-316CYS
Nonstandard amino acids Structure of CSOCSO
Uniprot ID P05164 ￫UniprotKB
S-S bonds 281:291,285:309,387:398,606:663,704:730
label_asym_ids of heme JB
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.09 Å
Assembly ID:  3  (author_defined_assembly)    
Structural data modeled
Oligomeric count 6
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others IA (NAGStructure of NAGNAG , BMAStructure of BMABMA , MANStructure of MANMAN ), JA (NAGStructure of NAGNAG , BMAStructure of BMABMA , MANStructure of MANMAN ), KA (NAGStructure of NAGNAG , BMAStructure of BMABMA , MANStructure of MANMAN , FUCStructure of FUCFUC ), LA (NAGStructure of NAGNAG , BMAStructure of BMABMA ), LB (CLStructure of CLCL ), MA (NAGStructure of NAGNAG ), NA (NAGStructure of NAGNAG , BMAStructure of BMABMA , MANStructure of MANMAN , FUCStructure of FUCFUC ), NB (CAStructure of CACA ), OB (CLStructure of CLCL ), QB (CAStructure of CACA ), RB (NAGStructure of NAGNAG ), SB (OXLStructure of OXLOXL )
Each chain information

Showing 2 chains with heme of 6. Show all chains

Chain N heme  
auth_asym_id N
Residue indices (Uniprot) 279-743 (279-744)
Missing residues 316CYS-316CYS
Nonstandard amino acids Structure of CSOCSO
Uniprot ID P05164 ￫UniprotKB
S-S bonds 281:291,285:309,387:398,606:663,704:730
label_asym_ids of heme MB
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain P heme  
auth_asym_id P
Residue indices (Uniprot) 279-743 (279-744)
Missing residues 316CYS-316CYS
Nonstandard amino acids Structure of CSOCSO
Uniprot ID P05164 ￫UniprotKB
S-S bonds 281:291,285:309,387:398,606:663,704:730
label_asym_ids of heme PB
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.09 Å
Assembly ID:  4  (author_defined_assembly)    
Structural data modeled
Oligomeric count 6
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AC (MANStructure of MANMAN ), OA (NAGStructure of NAGNAG ), PA (NAGStructure of NAGNAG ), QA (NAGStructure of NAGNAG , BMAStructure of BMABMA , MANStructure of MANMAN , FUCStructure of FUCFUC ), RA (NAGStructure of NAGNAG , BMAStructure of BMABMA ), SA (NAGStructure of NAGNAG ), TA (NAGStructure of NAGNAG , BMAStructure of BMABMA , MANStructure of MANMAN , FUCStructure of FUCFUC ), TB (CLStructure of CLCL ), VB (CAStructure of CACA ), WB (CLStructure of CLCL ), YB (CAStructure of CACA ), ZB (BMAStructure of BMABMA )
Each chain information

Showing 2 chains with heme of 6. Show all chains

Chain T heme  
auth_asym_id T
Residue indices (Uniprot) 279-743 (279-744)
Missing residues 316CYS-316CYS
Nonstandard amino acids Structure of CSOCSO
Uniprot ID P05164 ￫UniprotKB
S-S bonds 281:291,285:309,387:398,606:663,704:730
label_asym_ids of heme UB
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain V heme  
auth_asym_id V
Residue indices (Uniprot) 279-744 (279-744)
Missing residues 316CYS-316CYS
Nonstandard amino acids Structure of CSOCSO
Uniprot ID P05164 ￫UniprotKB
S-S bonds 281:291,285:309,387:398,606:663,704:730
label_asym_ids of heme XB
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å