PDB ID:  pdb_00007zic
  • Crystal structure of CYP125 from Mycobacterium tuberculosis in complex with an inhibitor
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • Deposition date: 2022-04-07
Number of assemblies:  3
Assembly ID:  1  (author_defined_assembly)    
Structural data PDB
Oligomeric count 1
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others D (GOLStructure of GOLGOL ), E (5YGStructure of 5YG5YG ), G (SO4Structure of SO4SO4 ), H (SO4Structure of SO4SO4 ), I (SO4Structure of SO4SO4 ), J (SO4Structure of SO4SO4 ), K (CLStructure of CLCL )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 17-428 (18-433)
Mutations (UniProt numbering)
Uniprot ID P9WPP1 →UniprotKB
label_asym_ids of heme F
Available structure PDB
Assembly ID:  2  (author_defined_assembly)    
Structural data modeled
Oligomeric count 1
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others L (5YGStructure of 5YG5YG ), N (SO4Structure of SO4SO4 ), O (SO4Structure of SO4SO4 ), P (SO4Structure of SO4SO4 ), Q (SO4Structure of SO4SO4 ), R (SO4Structure of SO4SO4 )
Each chain information
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 19-427 (18-433)
Mutations (UniProt numbering)
Missing residues 236ALA-237ASP:247ASP-249ASP
Structural gaps Exists
Uniprot ID P9WPP1 →UniprotKB
label_asym_ids of heme M
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Assembly ID:  3  (author_defined_assembly)    
Structural data PDB
Oligomeric count 1
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (SO4Structure of SO4SO4 ), BA (CLStructure of CLCL ), S (5YGStructure of 5YG5YG ), U (SO4Structure of SO4SO4 ), V (SO4Structure of SO4SO4 ), W (SO4Structure of SO4SO4 ), X (SO4Structure of SO4SO4 ), Y (SO4Structure of SO4SO4 ), Z (SO4Structure of SO4SO4 )
Each chain information
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 19-428 (18-433)
Mutations (UniProt numbering)
Uniprot ID P9WPP1 →UniprotKB
label_asym_ids of heme T
Available structure PDB