Danish
PDB ID:  pdb_00008ab7
  • Complex III2 from Yarrowia lipolytica, atovaquone and antimycin A bound
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: 3.3 Å
  • Deposition date: 2022-07-04
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data modeled
Oligomeric count 20
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (AWBStructure of AWBAWB ), BA (AOQStructure of AOQAOQ ), BB (CDLStructure of CDLCDL ), CA (FESStructure of FESFES ), CB (PC1Structure of PC1PC1 ), DA (PTYStructure of PTYPTY ), DB (LMTStructure of LMTLMT ), EA (CDLStructure of CDLCDL ), FA (CDLStructure of CDLCDL ), GA (XP4Structure of XP4XP4 ), IA (PTYStructure of PTYPTY ), JA (CDLStructure of CDLCDL ), KA (CDLStructure of CDLCDL ), LA (PC1Structure of PC1PC1 ), MA (LMTStructure of LMTLMT ), PA (PC1Structure of PC1PC1 ), QA (CDLStructure of CDLCDL ), RA (PTYStructure of PTYPTY ), SA (CDLStructure of CDLCDL ), TA (LMTStructure of LMTLMT ), UA (AWBStructure of AWBAWB ), VA (AOQStructure of AOQAOQ ), W (PC1Structure of PC1PC1 ), WA (FESStructure of FESFES ), X (PTYStructure of PTYPTY ), XA (CDLStructure of CDLCDL ), Y (CDLStructure of CDLCDL ), YA (CDLStructure of CDLCDL ), Z (LMTStructure of LMTLMT ), ZA (XP4Structure of XP4XP4 )
Each chain information

Showing all 20 chains (4 with heme). Show only chains with heme

Chain A heme  
auth_asym_id C
Residue indices (Uniprot) 1-383 (1-385)
Uniprot ID Q9B6D0 ￫UniprotKB
label_asym_ids of heme V ,  U
Available structure PDB
Chain B  
auth_asym_id P
Residue indices (Uniprot) 39-224 (1-225)
Uniprot ID Q6CI02 ￫UniprotKB
S-S bonds 173:189
label_asym_ids of heme None
Available structure PDB
Chain C  
auth_asym_id G
Residue indices (Uniprot) 2-125 (1-128)
Uniprot ID Q6C3K7 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id F
Residue indices (Uniprot) 76-146 (1-137)
Uniprot ID Q6C0H4 ￫UniprotKB
S-S bonds 91:133,101:123
label_asym_ids of heme None
Available structure PDB
Chain E  
auth_asym_id A
Residue indices (Uniprot) 26-474 (1-474)
Missing residues 249ARG-259PRO
Structural gaps Exists
Uniprot ID Q6CGY9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.16 Å
Chain F  
auth_asym_id B
Residue indices (Uniprot) 15-416 (1-417)
Uniprot ID Q6C2E3 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G heme  
auth_asym_id D
Residue indices (Uniprot) 85-328 (1-330)
Uniprot ID Q6CGP7 ￫UniprotKB
label_asym_ids of heme HA
Available structure PDB
Chain H  
auth_asym_id H
Residue indices (Uniprot) 9-93 (1-93)
Uniprot ID Q6C387 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id I
Residue indices (Uniprot) 4-57 (1-69)
Uniprot ID Q6CG23 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id J
Residue indices (Uniprot) 8-82 (1-82)
Uniprot ID Q6CC60 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K heme  
auth_asym_id N
Residue indices (Uniprot) 1-383 (1-385)
Uniprot ID Q9B6D0 ￫UniprotKB
label_asym_ids of heme OA ,  NA
Available structure PDB
Chain L  
auth_asym_id E
Residue indices (Uniprot) 39-224 (1-225)
Uniprot ID Q6CI02 ￫UniprotKB
S-S bonds 173:189
label_asym_ids of heme None
Available structure PDB
Chain M  
auth_asym_id R
Residue indices (Uniprot) 2-125 (1-128)
Uniprot ID Q6C3K7 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain N  
auth_asym_id Q
Residue indices (Uniprot) 76-146 (1-137)
Uniprot ID Q6C0H4 ￫UniprotKB
S-S bonds 91:133,101:123
label_asym_ids of heme None
Available structure PDB
Chain O  
auth_asym_id L
Residue indices (Uniprot) 26-474 (1-474)
Missing residues 249ARG-259PRO
Structural gaps Exists
Uniprot ID Q6CGY9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain P  
auth_asym_id M
Residue indices (Uniprot) 15-416 (1-417)
Uniprot ID Q6C2E3 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Q heme  
auth_asym_id O
Residue indices (Uniprot) 85-328 (1-330)
Uniprot ID Q6CGP7 ￫UniprotKB
label_asym_ids of heme AB
Available structure PDB
Chain R  
auth_asym_id S
Residue indices (Uniprot) 9-93 (1-93)
Uniprot ID Q6C387 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id T
Residue indices (Uniprot) 4-57 (1-69)
Uniprot ID Q6CG23 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id U
Residue indices (Uniprot) 8-82 (1-82)
Uniprot ID Q6CC60 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB