Danish

PDB ID: pdb_00008abf

Complex III2 from Yarrowia lipolytica, oxidised with ferricyanide, int-position
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposition date: 2022-07-04

Number of assemblies: 1

Assembly ID: 0 (author_defined_assembly)
Structural data	modeled
Oligomeric count	20
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others	AA (FES ), BA (LMT ), CA (PTY ), DA (CDL ), EA (CDL ), GA (CDL ), HA (CDL ), IA (PC1 ), JA (XP4 ), KA (LMT ), NA (PC1 ), OA (PTY ), PA (CDL ), QA (LMT ), RA (PTY ), SA (CDL ), TA (CDL ), UA (XP4 ), W (PC1 ), WA (CDL ), X (PTY ), XA (CDL ), Y (CDL ), YA (PC1 ), Z (LMT )

Each chain information

Showing all 20 chains (4 with heme). Show only chains with heme

Chain A heme
auth_asym_id	C
Residue indices (Uniprot)	1-383 (1-385)
Uniprot ID	Q9B6D0 ￫UniprotKB
label_asym_ids of heme	V , U
Available structure	PDB

Chain B
auth_asym_id	P
Residue indices (Uniprot)	39-224 (1-225)
Uniprot ID	Q6CI02 ￫UniprotKB
S-S bonds	173:189
label_asym_ids of heme	None
Available structure	PDB

Chain C
auth_asym_id	G
Residue indices (Uniprot)	2-125 (1-128)
Uniprot ID	Q6C3K7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain D
auth_asym_id	F
Residue indices (Uniprot)	76-146 (1-137)
Uniprot ID	Q6C0H4 ￫UniprotKB
S-S bonds	91:133,101:123
label_asym_ids of heme	None
Available structure	PDB

Chain E
auth_asym_id	A
Residue indices (Uniprot)	26-474 (1-474)
Missing residues	249ARG-259PRO
Structural gaps	Exists
Uniprot ID	Q6CGY9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.12 Å

Chain F
auth_asym_id	B
Residue indices (Uniprot)	15-416 (1-417)
Uniprot ID	Q6C2E3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain G heme
auth_asym_id	D
Residue indices (Uniprot)	85-328 (1-330)
Uniprot ID	Q6CGP7 ￫UniprotKB
label_asym_ids of heme	FA
Available structure	PDB

Chain H
auth_asym_id	H
Residue indices (Uniprot)	9-93 (1-93)
Uniprot ID	Q6C387 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain I
auth_asym_id	I
Residue indices (Uniprot)	4-57 (1-69)
Uniprot ID	Q6CG23 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain J
auth_asym_id	J
Residue indices (Uniprot)	8-82 (1-82)
Uniprot ID	Q6CC60 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain K heme
auth_asym_id	N
Residue indices (Uniprot)	1-383 (1-385)
Uniprot ID	Q9B6D0 ￫UniprotKB
label_asym_ids of heme	MA , LA
Available structure	PDB

Chain L
auth_asym_id	E
Residue indices (Uniprot)	39-99 (1-225)
Uniprot ID	Q6CI02 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain M
auth_asym_id	R
Residue indices (Uniprot)	2-125 (1-128)
Uniprot ID	Q6C3K7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain N
auth_asym_id	Q
Residue indices (Uniprot)	76-146 (1-137)
Uniprot ID	Q6C0H4 ￫UniprotKB
S-S bonds	91:133,101:123
label_asym_ids of heme	None
Available structure	PDB

Chain O
auth_asym_id	L
Residue indices (Uniprot)	26-474 (1-474)
Missing residues	249ARG-259PRO
Structural gaps	Exists
Uniprot ID	Q6CGY9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.13 Å

Chain P
auth_asym_id	M
Residue indices (Uniprot)	15-416 (1-417)
Uniprot ID	Q6C2E3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Q heme
auth_asym_id	O
Residue indices (Uniprot)	85-328 (1-330)
Uniprot ID	Q6CGP7 ￫UniprotKB
label_asym_ids of heme	VA
Available structure	PDB

Chain R
auth_asym_id	S
Residue indices (Uniprot)	9-93 (1-93)
Uniprot ID	Q6C387 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain S
auth_asym_id	T
Residue indices (Uniprot)	4-57 (1-69)
Uniprot ID	Q6CG23 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain T
auth_asym_id	U
Residue indices (Uniprot)	8-82 (1-82)
Uniprot ID	Q6CC60 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB