Danish

PDB ID: pdb_00008b6h

Cryo-EM structure of cytochrome c oxidase dimer (complex IV) from respiratory supercomplex of Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: unavailable
Deposition date: 2022-09-27

Number of assemblies: 1

Assembly ID: 0 (author_defined_assembly)
Structural data	modeled
Oligomeric count	106
label_asym_ids of protein	106 chains (4 with heme) A, AA, AB, AC, AD, B, BA, BB, BC, BD, C, CA, CB, CC, D, DA, DB, DC, E, EA, EB, EC, F, FA, FB, FC, G, GA, GB, GC, H, HA, HB, HC, I, IA, IB, IC, J, JA, JB, JC, K, KA, KB, KC, L, LA, LB, LC, M, MA, MB, MC, N, NA, NB, NC, O, OA, OB, OC, P, PA, PB, PC, Q, QA, QB, QC, R, RA, RB, RC, S, SA, SB, SC, T, TA, TB, TC, U, UA, UB, UC, V, VA, VB, VC, W, WA, WB, WC, X, XA, XB, XC, Y, YA, YB, YC, Z, ZA, ZB, ZC
label_asym_ids of heme	CD DD IL PG TH UH
label_asym_ids of the others	show AE (CDL), AF (CDL), AG (PC1), AH (CDL), AI (3PE), AJ (CDL), AK (3PE), AL (3PE), AM (3PE), BE (CDL), BF (CDL), BG (3PE), BH (CDL), BI (CDL), BJ (CDL), BK (3PE), BL (PC1), BM (CDL), CE (K), CF (PC1), CG (3PE), CH (CDL), CI (CA), CJ (CDL), CK (CDL), CL (CDL), CM (CDL), DE (CDL), DF (CDL), DG (3PE), DH (3PE), DI (CUA), DJ (CDL), DK (3PE), DL (PC1), DM (UQ8), ED (CU), EE (CDL), EF (3PE), EG (PC1), EH (UQ8), EI (PC1), EJ (CDL), EK (UQ8), EL (CDL), EM (PC1), FD (MG), FE (PC1), FF (CDL), FG (CDL), FH (3PE), FI (CDL), FJ (PC1), FK (CDL), FL (CDL), FM (3PE), GD (CDL), GE (3PE), GF (CDL), GG (CDL), GH (CDL), GI (PC1), GJ (3PE), GK (PC1), GL (PC1), GM (3PE), HD (PC1), HE (3PE), HF (3PE), HG (PC1), HH (CDL), HI (PC1), HJ (CDL), HK (3PE), HL (PC1), HM (PC1), ID (PC1), IE (CDL), IF (CDL), IG (CDL), IH (3PE), II (PC1), IJ (CDL), IK (CDL), IM (PC1), JD (3PE), JE (CDL), JF (3PE), JG (CDL), JH (UQ8), JI (PC1), JJ (CDL), JK (CDL), JL (UQ8), JM (CDL), KD (CDL), KE (PC1), KF (UQ8), KG (PC1), KH (PC1), KI (3PE), KJ (CDL), KK (CDL), KL (LPP), KM (ATP), LD (CDL), LE (3PE), LF (CDL), LG (CDL), LH (CDL), LI (PC1), LJ (CDL), LK (CDL), LL (CDL), LM (CDL), MD (LPP), ME (CDL), MF (PC1), MG (PC1), MH (3PE), MI (ZN), MJ (CDL), MK (CDL), ML (CDL), MM (LPP), ND (CA), NE (CDL), NF (PC1), NG (CDL), NH (3PE), NI (CDL), NJ (LPP), NK (CDL), NL (PC1), OD (CUA), OE (CDL), OF (CDL), OG (CDL), OH (PC1), OI (3PE), OJ (CDL), OK (CDL), OL (FES), PD (PC1), PE (CDL), PF (CDL), PH (PC1), PI (CDL), PJ (LPP), PK (CDL), PL (FES), QD (CDL), QE (PC1), QF (CDL), QG (UQ8), QH (PC1), QI (CDL), QJ (CDL), QK (PC1), QL (CDL), RD (PC1), RE (CDL), RF (CDL), RG (CDL), RH (ATP), RI (CDL), RJ (CDL), RK (PC1), RL (CDL), SD (PC1), SE (CDL), SF (CDL), SG (FES), SH (CDL), SI (CDL), SJ (CDL), SK (PC1), SL (CDL), TD (PC1), TE (CDL), TF (CDL), TG (FES), TI (CDL), TJ (CDL), TK (PC1), TL (CDL), UD (PC1), UE (CDL), UF (CDL), UG (CDL), UI (PC1), UJ (CDL), UK (CDL), UL (CDL), VD (3PE), VE (LPP), VF (CDL), VG (CDL), VH (CU), VI (3PE), VJ (CDL), VK (PC1), VL (CDL), WD (3PE), WE (LPP), WF (PC1), WG (CDL), WH (MG), WI (CDL), WJ (PC1), WK (CDL), WL (CDL), XD (PC1), XE (CDL), XF (PC1), XG (LPP), XH (CDL), XI (CDL), XJ (3PE), XK (PC1), XL (PC1), YD (ZN), YE (CDL), YF (PC1), YG (CDL), YH (PC1), YI (CDL), YJ (CDL), YK (3PE), YL (3PE), ZD (CDL), ZE (CDL), ZF (CDL), ZG (CDL), ZH (PC1), ZI (PC1), ZJ (CDL), ZK (3PE), ZL (UQ8)

Each chain information

Showing 4 chains with heme of 106. Show all chains

Chain A heme
auth_asym_id	DA
Residue indices (Uniprot)	18-688 (1-688)
Mutations (UniProt numbering)	G288A
Uniprot ID	Q950Y4 ￫UniprotKB
label_asym_ids of heme	DD , CD
Available structure	PDB

Chain AB heme
auth_asym_id	Da
Residue indices (Uniprot)	18-688 (1-688)
Mutations (UniProt numbering)	G288A
Uniprot ID	Q950Y4 ￫UniprotKB
label_asym_ids of heme	UH , TH
Available structure	PDB

Chain CA heme
auth_asym_id	ED
Residue indices (Uniprot)	1-190 (1-190)
Uniprot ID	Q951A7 ￫UniprotKB
label_asym_ids of heme	PG
Available structure	PDB

Chain CC heme
auth_asym_id	Ed
Residue indices (Uniprot)	1-190 (1-190)
Uniprot ID	Q951A7 ￫UniprotKB
label_asym_ids of heme	IL
Available structure	PDB