Danish
PDB ID:  pdb_00008d4t
  • Mammalian CIV with GDN bound
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: 3.1 Å
  • Deposition date: 2022-06-02
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data modeled
Oligomeric count 13
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others N (CUStructure of CUCU ), O (MGStructure of MGMG ), P (NAStructure of NANA ), S (PGVStructure of PGVPGV ), T (CUStructure of CUCU ), U (CUStructure of CUCU ), V (PEKStructure of PEKPEK ), W (PGVStructure of PGVPGV ), X (9Z9Structure of 9Z99Z9 ), Y (ZNStructure of ZNZN )
Each chain information

Showing all 13 chains (1 with heme). Show only chains with heme

Chain A heme  
auth_asym_id N
Residue indices (Uniprot) 1-513 (1-513)
Missing residues 1MET-1MET:510TYR-510TYR
Structural gaps Exists
Nonstandard amino acids Structure of FMEFME
Uniprot ID P00396 ￫UniprotKB
label_asym_ids of heme R ,  Q
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.09 Å
Chain B  
auth_asym_id O
Residue indices (Uniprot) 1-227 (1-227)
Missing residues 1MET-1MET
Nonstandard amino acids Structure of FMEFME
Uniprot ID P68530 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.09 Å
Chain C  
auth_asym_id P
Residue indices (Uniprot) 4-261 (4-261)
Uniprot ID P00415 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id Q
Residue indices (Uniprot) 10-146 (32-168)
Uniprot ID P00423 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain E  
auth_asym_id R
Residue indices (Uniprot) 6-107 (49-150)
Uniprot ID P00426 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain F  
auth_asym_id S
Residue indices (Uniprot) 4-94 (35-125)
Uniprot ID P00428 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id T
Residue indices (Uniprot) 12-83 (24-95)
Uniprot ID P07471 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id U
Residue indices (Uniprot) 8-85 (9-86)
Uniprot ID P00429 ￫UniprotKB
S-S bonds 29:64,39:53
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id V
Residue indices (Uniprot) 4-73 (5-74)
Uniprot ID P04038 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id W
Residue indices (Uniprot) 1-55 (22-76)
Uniprot ID P07470 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id X
Residue indices (Uniprot) 8-54 (32-78)
Uniprot ID P13183 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id Y
Residue indices (Uniprot) 2-47 (18-63)
Uniprot ID P00430 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain M  
auth_asym_id M
Residue indices (Uniprot) 26-68 (26-68)
Uniprot ID P10176 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB