Danish
PDB ID:  pdb_00008eqm
  • Structure of a dimeric photosystem II complex acclimated to far-red light
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: unavailable
  • Deposition date: 2022-10-08
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data including_not_modeled
Oligomeric count 32
label_asym_ids of protein
32 chains (6 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z
label_asym_ids of heme AF HF MC TC
label_asym_ids of the others
show AB (CLA), AC (DGD), AD (CLA), AE (CLA), BB (CLA), BC (BCR), BD (BCR), BE (CLA), BF (CLA), CB (CLA), CC (CL7), CD (SQD), CE (CLA), CF (RRX), DB (CLA), DC (PHO), DD (PL9), DE (CLA), DF (LHG), EB (F6C), EC (CLA), ED (BCT), EE (CLA), EF (SQD), FB (CLA), FC (CLA), FD (LHG), FE (F6C), FF (LMG), GA (OEX), GB (CLA), GC (BCR), GD (CLA), GE (CLA), GF (LMT), HA (FE2), HB (BCR), HC (PL9), HD (CLA), HE (CLA), IA (CL), IB (BCR), IC (LHG), ID (CLA), IE (CLA), JA (CLA), JB (BCR), JC (LHG), JD (F6C), JE (CLA), KA (CLA), KB (CL), KC (LMG), KD (CLA), KE (CLA), LA (PHO), LB (CLA), LC (DGD), LD (CLA), LE (CLA), MA (CLA), MB (CLA), MD (F6C), ME (BCR), NA (BCR), NB (CLA), NC (CLA), ND (CLA), NE (DGD), OA (SQD), OB (CLA), OC (RRX), OD (CLA), OE (DGD), PA (PL9), PB (CLA), PC (LHG), PD (CLA), PE (BCR), QA (BCT), QB (CLA), QC (SQD), QD (CLA), QE (CL7), RA (LHG), RB (F6C), RC (LMG), RD (CLA), RE (PHO), SA (CLA), SB (CLA), SC (LMT), SD (F6C), SE (CLA), TA (CLA), TB (CLA), TD (CLA), TE (CLA), UA (CLA), UB (CLA), UC (OEX), UD (CLA), UE (BCR), VA (F6C), VB (CLA), VC (FE2), VD (BCR), VE (PL9), WA (CLA), WB (CLA), WC (CL), WD (BCR), WE (LHG), XA (CLA), XB (CLA), XC (CLA), XD (BCR), XE (LHG), YA (F6C), YB (BCR), YC (CLA), YD (CL), YE (LMG), ZA (CLA), ZB (DGD), ZC (PHO), ZD (CLA), ZE (DGD)
Each chain information

Showing all 32 chains (6 with heme). Show only chains with heme

Chain A  
auth_asym_id A
Residue indices (Uniprot) 13-345 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain AA  
auth_asym_id m
Residue indices (Uniprot) 1-31 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain B  
auth_asym_id B
Residue indices (Uniprot) 2-484 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain BA  
auth_asym_id o
Residue indices (Uniprot) 28-270 (-)
Structural gaps Exists
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain C  
auth_asym_id C
Residue indices (Uniprot) 28-480 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain CA  
auth_asym_id t
Residue indices (Uniprot) 1-30 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id D
Residue indices (Uniprot) 14-351 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain DA  
auth_asym_id u
Residue indices (Uniprot) 81-159 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 20-72 (-)
Missing residues 58SER-62GLU
Structural gaps Exists
Uniprot ID Unavailable
label_asym_ids of heme MC
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.15 Å
Chain EA heme  
auth_asym_id v
Residue indices (Uniprot) 39-169 (-)
Uniprot ID Unavailable
label_asym_ids of heme HF
Available structure PDB
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 15-44 (-)
Uniprot ID Unavailable
label_asym_ids of heme MC
Available structure PDB
Chain FA  
auth_asym_id x
Residue indices (Uniprot) 1-35 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id H
Residue indices (Uniprot) 2-66 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id I
Residue indices (Uniprot) 1-34 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id K
Residue indices (Uniprot) 9-45 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id L
Residue indices (Uniprot) 11-40 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id M
Residue indices (Uniprot) 1-31 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id O
Residue indices (Uniprot) 28-270 (-)
Structural gaps Exists
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain M  
auth_asym_id T
Residue indices (Uniprot) 1-30 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain N  
auth_asym_id U
Residue indices (Uniprot) 81-159 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain O heme  
auth_asym_id V
Residue indices (Uniprot) 39-169 (-)
Uniprot ID Unavailable
label_asym_ids of heme TC
Available structure PDB
Chain P  
auth_asym_id X
Residue indices (Uniprot) 1-35 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id a
Residue indices (Uniprot) 13-345 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain R  
auth_asym_id b
Residue indices (Uniprot) 2-484 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id c
Residue indices (Uniprot) 28-480 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id d
Residue indices (Uniprot) 14-351 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain U heme  
auth_asym_id e
Residue indices (Uniprot) 20-72 (-)
Missing residues 58SER-62GLU
Structural gaps Exists
Uniprot ID Unavailable
label_asym_ids of heme AF
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.16 Å
Chain V heme  
auth_asym_id f
Residue indices (Uniprot) 15-44 (-)
Uniprot ID Unavailable
label_asym_ids of heme AF
Available structure PDB
Chain W  
auth_asym_id h
Residue indices (Uniprot) 2-66 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain X  
auth_asym_id i
Residue indices (Uniprot) 1-34 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain Y  
auth_asym_id k
Residue indices (Uniprot) 9-45 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain Z  
auth_asym_id l
Residue indices (Uniprot) 11-40 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB