PDB ID:  pdb_00008ing
  • Structure of the ternary complex of lactoperoxidase with substrate nitric oxide (NO) and product nitrite ion (NO2) at 1.98 A resolution
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • Deposition date: 2023-03-09
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data modeled
Oligomeric count 1
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (IODStructure of IODIOD ), B (NAGStructure of NAGNAG ), C (NAGStructure of NAGNAG ), CA (EDOStructure of EDOEDO ), D (NAGStructure of NAGNAG ), DA (CAStructure of CACA ), E (NAGStructure of NAGNAG ), EA (EDOStructure of EDOEDO ), F (NOStructure of NONO ), FA (NOStructure of NONO ), G (NO2Structure of NO2NO2 ), GA (SCNStructure of SCNSCN ), H (NO3Structure of NO3NO3 ), HA (OSMStructure of OSMOSM ), I (NO3Structure of NO3NO3 ), IA (IODStructure of IODIOD ), J (SCNStructure of SCNSCN ), JA (IODStructure of IODIOD ), K (SCNStructure of SCNSCN ), KA (IODStructure of IODIOD ), L (EDOStructure of EDOEDO ), LA (IODStructure of IODIOD ), M (SCNStructure of SCNSCN ), MA (NAStructure of NANA ), N (NO3Structure of NO3NO3 ), NA (NAStructure of NANA ), O (NO3Structure of NO3NO3 ), P (NO3Structure of NO3NO3 ), Q (NO3Structure of NO3NO3 ), R (NO3Structure of NO3NO3 ), S (IODStructure of IODIOD ), T (IODStructure of IODIOD ), U (IODStructure of IODIOD ), V (IODStructure of IODIOD ), W (IODStructure of IODIOD ), X (IODStructure of IODIOD ), Y (IODStructure of IODIOD ), Z (IODStructure of IODIOD )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 1-595 (118-712)
Missing residues 198SER-198SER
Nonstandard amino acids Structure of SEPSEP
Uniprot ID A0A452E9Y6 →UniprotKB
S-S bonds 6:167,15:28,129:139,133:157,237:248,456:513,554:579
label_asym_ids of heme BA
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å