Danish

PDB ID: pdb_00008ir5

XFEL structure of cyanobacterial photosystem II under dark conditions
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposition date: 2023-03-17

Number of assemblies: 1

Assembly ID: 0 (author_and_software_defined_assembly)
Structural data	modeled
Oligomeric count	39
label_asym_ids of protein	39 chains (6 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, KA, L, LA, M, MA, N, O, P, Q, R, S, T, U, V, W, X, Y, Z
label_asym_ids of heme	FI OE WD YI
label_asym_ids of the others	show AB (PL9), AC (BCR), AD (BCR), AE (DGD), AF (PHO), AG (CLA), AH (CLA), AI (UNL), AJ (UNL), BB (UNL), BC (SQD), BD (DGD), BE (UNL), BF (CLA), BG (CLA), BH (CLA), BI (HTG), BJ (BCR), CB (PHO), CC (LMG), CD (DGD), CE (UNL), CF (BCR), CG (CLA), CH (CLA), CI (LMG), CJ (LMG), DB (LMT), DC (HTG), DD (DGD), DE (MG), DF (SQD), DG (CLA), DH (CLA), DI (LHG), DJ (LMG), EB (GOL), EC (HTG), ED (LMG), EE (BCR), EF (GOL), EG (BCR), EH (CLA), EI (LMT), FB (LMG), FC (GOL), FD (LMG), FE (UNL), FF (SQD), FG (BCR), FH (CLA), GB (LHG), GC (HTG), GD (HTG), GE (BCR), GF (OEX), GG (BCR), GH (BCR), GI (SQD), HB (LMT), HC (UNL), HD (GOL), HE (LHG), HF (PL9), HG (SQD), HH (BCR), HI (CA), IB (CLA), IC (GOL), ID (CA), IE (LMT), IF (UNL), IG (LMT), IH (DGD), II (BCR), JB (CLA), JC (LMT), JD (BCT), JE (CA), JF (PHO), JG (HTG), JH (DGD), JI (DGD), KB (CLA), KC (GOL), KD (CLA), KE (GOL), KF (LMG), KG (HTG), KH (DGD), KI (UNL), LB (CLA), LC (LMT), LD (CLA), LE (GOL), LF (GOL), LG (GOL), LH (LMG), LI (UNL), MB (CLA), MC (LMT), MD (BCR), ME (LMT), MF (GOL), MG (HTG), MH (LMG), MI (MG), NA (FE2), NB (CLA), NC (CLA), ND (PL9), NE (BCR), NF (LHG), NG (UNL), NH (HTG), NI (BCR), OA (CL), OB (CLA), OC (CLA), OD (LHG), OF (CLA), OG (LMT), OH (CA), OI (UNL), PA (CL), PB (CLA), PC (CLA), PD (LHG), PE (HTG), PF (CLA), PG (GOL), PH (CA), PI (GOL), QA (CLA), QB (CLA), QC (CLA), QD (UNL), QE (GOL), QF (CLA), QG (GOL), QH (UNL), QI (LMG), RA (CLA), RB (CLA), RC (CLA), RD (UNL), RE (UNL), RF (CLA), RG (LHG), RH (GOL), RI (UNL), SA (CLA), SB (CLA), SC (CLA), SD (HTG), SE (BCR), SF (CLA), SG (LMT), SH (GOL), SI (LMT), TA (PHO), TB (CLA), TC (CLA), TD (LMG), TE (FE2), TF (CLA), TG (CLA), TH (CLA), TI (CA), UA (CLA), UB (CLA), UC (CLA), UD (LHG), UE (CL), UF (CLA), UG (CLA), UH (CLA), UI (GOL), VA (BCR), VB (CLA), VC (CLA), VD (LMT), VE (CL), VF (CLA), VG (CLA), VH (BCR), VI (GOL), WA (SQD), WB (CLA), WC (CLA), WE (BCT), WF (CLA), WG (CLA), WH (PL9), WI (LMT), XA (GOL), XB (CLA), XC (CLA), XD (SQD), XE (CLA), XF (CLA), XG (CLA), XH (LHG), XI (BCR), YA (SQD), YB (BCR), YC (CLA), YD (CA), YE (CLA), YF (CLA), YG (CLA), YH (LHG), ZA (OEX), ZB (BCR), ZC (CLA), ZD (BCR), ZE (CLA), ZF (CLA), ZG (CLA), ZH (UNL), ZI (GOL)

Each chain information

Showing 6 chains with heme of 39. Show all chains

Chain E heme
auth_asym_id	E
Residue indices (Uniprot)	4-84 (1-84)
Uniprot ID	P12238 ￫UniprotKB
label_asym_ids of heme	WD
Available structure	PDB

Chain F heme
auth_asym_id	F
Residue indices (Uniprot)	12-45 (2-45)
Uniprot ID	P12239 ￫UniprotKB
label_asym_ids of heme	WD
Available structure	PDB

Chain HA heme
auth_asym_id	v
Residue indices (Uniprot)	1-137 (27-163)
Uniprot ID	P0A387 ￫UniprotKB
label_asym_ids of heme	YI
Available structure	PDB

Chain P heme
auth_asym_id	V
Residue indices (Uniprot)	1-137 (27-163)
Uniprot ID	P0A387 ￫UniprotKB
label_asym_ids of heme	OE
Available structure	PDB

Chain W heme
auth_asym_id	e
Residue indices (Uniprot)	6-84 (1-84)
Uniprot ID	P12238 ￫UniprotKB
label_asym_ids of heme	FI
Available structure	PDB

Chain X heme
auth_asym_id	f
Residue indices (Uniprot)	15-45 (2-45)
Uniprot ID	P12239 ￫UniprotKB
label_asym_ids of heme	FI
Available structure	PDB