Danish
PDB ID:  pdb_00008iuj
  • Cryo-EM structure of Euglena gracilis super-complex III2+IV2, composite
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: unavailable
  • Deposition date: 2023-03-24
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data modeled
Oligomeric count 60
label_asym_ids of protein
60 chains (6 with heme) A, AA, AB, B, BA, BB, C, CA, CB, D, DA, DB, E, EA, EB, F, FA, FB, G, GA, GB, H, HA, HB, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, OA, P, PA, Q, QA, R, RA, S, SA, T, TA, U, UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA
label_asym_ids of heme AD BD IB JB KC LB LC SB TB WB
label_asym_ids of the others
show AC (CDL), AE (3PE), BC (PC1), BE (3PE), CC (CDL), CD (CU), CE (S12), DC (PC1), DD (MG), DE (ZN), EC (3PE), ED (PC1), EE (3PE), FC (CDL), FD (CDL), GC (PC1), GD (3PE), HC (CDL), HD (3PE), IC (CDL), ID (PC1), JC (PC1), JD (CU), KB (CDL), KD (CU), LD (PC1), MB (CDL), MC (CU), MD (PC1), NB (PC1), NC (MG), ND (FES), OB (PX2), OC (PC1), OD (CDL), PB (CDL), PC (3PE), PD (PC1), QB (PX2), QC (3PE), QD (PC1), RB (CDL), RC (PC1), RD (PC1), SC (CU), SD (FES), TC (CU), TD (PC1), UB (PC1), UC (PC1), UD (PC1), VB (CDL), VC (PC1), VD (ZN), WC (PC1), WD (3PE), XB (CDL), XC (PX2), XD (3PE), YB (PC1), YC (PC1), YD (S12), ZB (CDL), ZC (CDL), ZD (3PE)
Each chain information

Showing all 60 chains (6 with heme). Show only chains with heme

Chain A  
auth_asym_id QA
Residue indices (Uniprot) 1-476 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain AA  
auth_asym_id 4C
Residue indices (Uniprot) 16-138 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain AB  
auth_asym_id 4I
Residue indices (Uniprot) 10-274 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain B heme  
auth_asym_id QC
Residue indices (Uniprot) 2-365 (13-380)
Uniprot ID A0A0S2YRT7 ￫UniprotKB
label_asym_ids of heme JB ,  IB
Available structure PDB
Chain BA  
auth_asym_id 4E
Residue indices (Uniprot) 2-161 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain BB  
auth_asym_id 7a
Residue indices (Uniprot) 1-178 (-)
Missing residues 48THR-60THR
Structural gaps Exists
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain C heme  
auth_asym_id QD
Residue indices (Uniprot) 3-243 (1-243)
Uniprot ID P20114 ￫UniprotKB
label_asym_ids of heme LB
Available structure PDB
Chain CA  
auth_asym_id 4H
Residue indices (Uniprot) 17-221 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain CB  
auth_asym_id 4d
Residue indices (Uniprot) 2-174 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id QH
Residue indices (Uniprot) 2-86 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain DA  
auth_asym_id 4J
Residue indices (Uniprot) 1-88 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain DB  
auth_asym_id 4f
Residue indices (Uniprot) 1-75 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain E  
auth_asym_id QJ
Residue indices (Uniprot) 6-154 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain EA  
auth_asym_id 5C
Residue indices (Uniprot) 12-207 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain EB  
auth_asym_id 4g
Residue indices (Uniprot) 19-315 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain F  
auth_asym_id QK
Residue indices (Uniprot) 31-91 (1-100)
Uniprot ID P43266 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain FA  
auth_asym_id 6B
Residue indices (Uniprot) 1-282 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain FB  
auth_asym_id 4i
Residue indices (Uniprot) 10-274 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id Qa
Residue indices (Uniprot) 1-476 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain GA  
auth_asym_id 7C
Residue indices (Uniprot) 21-171 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain GB  
auth_asym_id 5b
Residue indices (Uniprot) 18-174 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain H heme  
auth_asym_id Qc
Residue indices (Uniprot) 2-365 (13-380)
Uniprot ID A0A0S2YRT7 ￫UniprotKB
label_asym_ids of heme TB ,  SB
Available structure PDB
Chain HA heme  
auth_asym_id C1
Residue indices (Uniprot) 1-495 (1-495)
Uniprot ID Q34463 ￫UniprotKB
label_asym_ids of heme BD ,  AD
Available structure PDB
Chain HB  
auth_asym_id 7A
Residue indices (Uniprot) 1-178 (-)
Missing residues 48THR-60THR
Structural gaps Exists
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain I heme  
auth_asym_id Qd
Residue indices (Uniprot) 3-243 (1-243)
Uniprot ID P20114 ￫UniprotKB
label_asym_ids of heme WB
Available structure PDB
Chain IA  
auth_asym_id C2
Residue indices (Uniprot) 1-196 (1-196)
Uniprot ID Q9XN19 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id Qh
Residue indices (Uniprot) 2-86 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain JA  
auth_asym_id C3
Residue indices (Uniprot) 1-161 (1-161)
Uniprot ID Q9XN18 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id Qj
Residue indices (Uniprot) 6-154 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain KA  
auth_asym_id DC
Residue indices (Uniprot) 13-179 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id Qk
Residue indices (Uniprot) 31-91 (1-100)
Uniprot ID P43266 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain LA  
auth_asym_id 6A
Residue indices (Uniprot) 1-111 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain M  
auth_asym_id 4a
Residue indices (Uniprot) 43-246 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain MA  
auth_asym_id QE
Residue indices (Uniprot) 17-247 (-)
Uniprot ID Unavailable
S-S bonds 195:211
label_asym_ids of heme None
Available structure PDB
Chain N  
auth_asym_id 4c
Residue indices (Uniprot) 16-138 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain NA  
auth_asym_id Qe
Residue indices (Uniprot) 17-247 (-)
Uniprot ID Unavailable
S-S bonds 195:211
label_asym_ids of heme None
Available structure PDB
Chain O  
auth_asym_id 4e
Residue indices (Uniprot) 2-161 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain OA  
auth_asym_id QF
Residue indices (Uniprot) 9-72 (-)
Uniprot ID Unavailable
S-S bonds 26:58
label_asym_ids of heme None
Available structure PDB
Chain P  
auth_asym_id 4h
Residue indices (Uniprot) 17-221 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain PA  
auth_asym_id QG
Residue indices (Uniprot) 1-228 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id 4j
Residue indices (Uniprot) 1-88 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain QA  
auth_asym_id QI
Residue indices (Uniprot) 1-70 (-)
Nonstandard amino acids UNK Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain R  
auth_asym_id 5c
Residue indices (Uniprot) 12-207 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain RA  
auth_asym_id Qb
Residue indices (Uniprot) 20-474 (1-474)
Uniprot ID P43265 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id 6a
Residue indices (Uniprot) 1-91 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain SA  
auth_asym_id Qf
Residue indices (Uniprot) 9-72 (-)
Uniprot ID Unavailable
S-S bonds 26:58
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id 6b
Residue indices (Uniprot) 1-282 (-)
Uniprot ID Unavailable
S-S bonds 63:74
label_asym_ids of heme None
Available structure PDB
Chain TA  
auth_asym_id Qg
Residue indices (Uniprot) 1-228 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain U  
auth_asym_id 7c
Residue indices (Uniprot) 21-171 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain UA  
auth_asym_id Qi
Residue indices (Uniprot) 1-70 (-)
Nonstandard amino acids UNK Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain V heme  
auth_asym_id c1
Residue indices (Uniprot) 1-495 (1-495)
Uniprot ID Q34463 ￫UniprotKB
label_asym_ids of heme LC ,  KC
Available structure PDB
Chain VA  
auth_asym_id QB
Residue indices (Uniprot) 20-474 (1-474)
Uniprot ID P43265 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain W  
auth_asym_id c2
Residue indices (Uniprot) 1-196 (1-196)
Uniprot ID Q9XN19 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain WA  
auth_asym_id 5B
Residue indices (Uniprot) 18-174 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain X  
auth_asym_id c3
Residue indices (Uniprot) 1-161 (1-161)
Uniprot ID Q9XN18 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain XA  
auth_asym_id 4D
Residue indices (Uniprot) 2-174 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain Y  
auth_asym_id dc
Residue indices (Uniprot) 13-179 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain YA  
auth_asym_id 4F
Residue indices (Uniprot) 1-75 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain Z  
auth_asym_id 4A
Residue indices (Uniprot) 43-246 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain ZA  
auth_asym_id 4G
Residue indices (Uniprot) 19-315 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB