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PDB ID: pdb_00008iwh

Structure and characteristics of a photosystem II supercomplex containing monomeric LHCX and dimeric FCPII antennae from the diatom Thalassiosira pseudonana
Experimental method: ELECTRON MICROSCOPY
Resolution: unavailable
Deposition date: 2023-03-30

Number of assemblies: 1

Assembly ID: 0 (author_defined_assembly)
Structural data	PDB
Oligomeric count	56
label_asym_ids of protein	56 chains (5 with heme) A, AA, AB, B, BA, BB, C, CA, CB, D, DA, DB, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, OA, P, PA, Q, QA, R, RA, S, SA, T, TA, U, UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA
label_asym_ids of heme	AF BF XF YF
label_asym_ids of the others	show AC (CLA), AD (CLA), AE (DGD), AG (LHG), AH (CLA), AI (A86), AJ (CLA), AK (CL), AL (BCR), AM (A86), AN (CLA), AO (DD6), BC (CLA), BD (CLA), BE (DGD), BG (CLA), BH (DGD), BI (CLA), BJ (KC1), BK (CLA), BL (BCR), BM (DD6), BN (CLA), BO (CLA), CC (CLA), CD (BCR), CE (DGD), CF (BCR), CG (LHG), CH (A86), CI (CLA), CJ (CLA), CK (CLA), CL (BCR), CM (DD6), CN (CLA), CO (CLA), DC (CLA), DD (BCR), DE (LMG), DF (DGD), DG (LMU), DH (A86), DI (KC2), DJ (CLA), DK (PHO), DL (LMG), DM (CLA), DN (CLA), DO (CLA), EB (BCR), EC (CLA), ED (DGD), EE (LMG), EF (CLA), EG (CLA), EH (DD6), EI (CLA), EJ (A86), EK (PHO), EL (LMG), EM (CLA), EN (CLA), EO (CLA), FB (OEX), FC (CLA), FD (DGD), FE (FE2), FF (LHG), FG (LMG), FH (A86), FI (CLA), FJ (ET4), FK (CLA), FL (LMG), FM (CLA), FN (CLA), FO (CLA), GB (CL), GC (CLA), GD (DGD), GE (CLA), GF (BCR), GG (CLA), GH (CLA), GI (CLA), GJ (A86), GK (BCR), GL (LMG), GM (CLA), GN (CLA), GO (CLA), HB (CLA), HC (CLA), HD (LMG), HE (SQD), HF (DGD), HG (CLA), HH (CLA), HI (CLA), HJ (CLA), HK (SQD), HL (LMG), HM (CLA), HN (A86), HO (CLA), IB (CLA), IC (CLA), ID (LMG), IE (LMG), IF (LHG), IG (LMU), IH (KC2), II (KC1), IJ (CLA), IK (BCR), IL (LMG), IM (CLA), IN (A86), IO (CLA), JB (PHO), JC (BCR), JD (LMG), JE (CLA), JF (SQD), JG (CLA), JH (CLA), JI (CLA), JJ (KC2), JK (LHG), JL (A86), JM (CLA), JN (DD6), JO (CLA), KB (PHO), KC (BCR), KD (LMG), KE (CLA), KF (BCR), KG (CLA), KH (CLA), KI (CLA), KJ (CLA), KK (CLA), KL (ET4), KM (CLA), KN (DD6), KO (CLA), LB (CLA), LC (BCR), LD (CLA), LE (BCR), LF (BCR), LG (CLA), LH (CLA), LI (LHG), LJ (CLA), LK (CLA), LL (A86), LM (CLA), LN (CLA), LO (CLA), MB (BCR), MC (LMG), MD (CLA), ME (PL9), MF (BCR), MG (CLA), MH (CLA), MI (LMG), MJ (CLA), MK (CLA), ML (CLA), MM (CLA), MN (CLA), MO (CLA), NB (BCT), NC (LMG), ND (CLA), NE (LHG), NF (BCR), NG (CLA), NH (CLA), NI (LMU), NJ (CLA), NK (CLA), NL (CLA), NM (CLA), NN (CLA), OB (LHG), OC (SQD), OD (CLA), OE (LMG), OF (SQD), OG (CLA), OH (CLA), OI (A86), OJ (CLA), OK (CLA), OL (KC2), OM (CLA), ON (CLA), PB (LHG), PC (CLA), PD (CLA), PE (LHG), PF (SQD), PG (CLA), PH (CLA), PI (A86), PJ (CLA), PK (CLA), PL (CLA), PM (CLA), PN (CLA), QB (SQD), QC (CLA), QD (CLA), QE (CLA), QF (LMG), QG (CLA), QH (CLA), QI (A86), QJ (CLA), QK (CLA), QL (CLA), QM (A86), QN (CLA), RB (LHG), RC (CLA), RD (CLA), RE (CLA), RF (LMG), RG (KC1), RH (CLA), RI (A86), RJ (CLA), RK (CLA), RL (CLA), RM (A86), RN (CLA), SB (DGD), SC (CLA), SD (CLA), SE (BCR), SF (SQD), SG (CLA), SH (LMU), SI (A86), SJ (LMG), SK (CLA), SL (CLA), SM (DD6), SN (CLA), TB (CLA), TC (CLA), TD (CLA), TE (PL9), TF (LMU), TG (CLA), TH (LHG), TI (A86), TJ (LHG), TK (CLA), TL (CLA), TM (DD6), TN (CLA), UB (CLA), UC (CLA), UD (CLA), UE (LHG), UF (SQD), UG (CLA), UH (A86), UI (CLA), UJ (SQD), UK (CLA), UL (CLA), UM (CLA), UN (CLA), VB (CLA), VC (CLA), VD (CLA), VE (LMG), VF (LMU), VG (A86), VH (A86), VI (CLA), VJ (DGD), VK (CLA), VL (CLA), VM (CLA), VN (CLA), WB (CLA), WC (CLA), WD (CLA), WE (LHG), WF (SQD), WG (DD6), WH (A86), WI (KC2), WJ (BCT), WK (CLA), WL (LMG), WM (CLA), WN (CLA), XB (CLA), XC (CLA), XD (CLA), XE (FE2), XG (LMG), XH (A86), XI (CLA), XJ (LHG), XK (CLA), XL (LHG), XM (CLA), XN (A86), YB (CLA), YC (CLA), YD (BCR), YE (CLA), YG (LHG), YH (A86), YI (CLA), YJ (LHG), YK (CLA), YL (SQD), YM (CLA), YN (A86), ZB (CLA), ZC (CLA), ZD (BCR), ZE (LMG), ZF (LMG), ZG (LHG), ZH (A86), ZI (CLA), ZJ (OEX), ZK (CLA), ZL (A86), ZM (CLA), ZN (DD6)

Each chain information

Showing all 56 chains (5 with heme). Show only chains with heme

Chain A
auth_asym_id	A
Residue indices (Uniprot)	11-343 (11-343)
Uniprot ID	A0T0W2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain AA
auth_asym_id	O
Residue indices (Uniprot)	58-305 (1-305)
Uniprot ID	B8C4I5 ￫UniprotKB
S-S bonds	81:102
label_asym_ids of heme	None
Available structure	PDB

Chain AB
auth_asym_id	9
Residue indices (Uniprot)	31-193 (1-193)
Uniprot ID	B8BX93 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain B
auth_asym_id	B
Residue indices (Uniprot)	2-479 (1-509)
Uniprot ID	A0T0P5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain BA
auth_asym_id	o
Residue indices (Uniprot)	58-305 (1-305)
Uniprot ID	B8C4I5 ￫UniprotKB
S-S bonds	81:102
label_asym_ids of heme	None
Available structure	PDB

Chain BB
auth_asym_id	2
Residue indices (Uniprot)	31-193 (1-193)
Uniprot ID	B8BX93 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain C
auth_asym_id	C
Residue indices (Uniprot)	21-470 (1-470)
Uniprot ID	A0T0T1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain CA
auth_asym_id	T
Residue indices (Uniprot)	1-28 (1-28)
Uniprot ID	A0T0P6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain CB
auth_asym_id	8
Residue indices (Uniprot)	31-193 (1-193)
Uniprot ID	B8BX93 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain D
auth_asym_id	c
Residue indices (Uniprot)	21-470 (1-470)
Uniprot ID	A0T0T1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain DA
auth_asym_id	t
Residue indices (Uniprot)	1-28 (1-28)
Uniprot ID	A0T0P6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain DB
auth_asym_id	1
Residue indices (Uniprot)	31-193 (1-193)
Uniprot ID	B8BX93 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain E
auth_asym_id	D
Residue indices (Uniprot)	11-351 (1-351)
Uniprot ID	A0T0T0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain EA
auth_asym_id	U
Residue indices (Uniprot)	56-147 (1-148)
Uniprot ID	B8BVI4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain F
auth_asym_id	d
Residue indices (Uniprot)	11-351 (1-351)
Uniprot ID	A0T0T0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain FA
auth_asym_id	u
Residue indices (Uniprot)	56-147 (1-148)
Uniprot ID	B8BVI4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain G
auth_asym_id	E
Residue indices (Uniprot)	8-83 (1-84)
Uniprot ID	A0T0U2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain GA heme
auth_asym_id	V
Residue indices (Uniprot)	28-162 (1-162)
Uniprot ID	A0T0N2 ￫UniprotKB
label_asym_ids of heme	XF
Available structure	PDB

Chain H heme
auth_asym_id	e
Residue indices (Uniprot)	8-83 (1-84)
Uniprot ID	A0T0U2 ￫UniprotKB
label_asym_ids of heme	AF
Available structure	PDB

Chain HA heme
auth_asym_id	v
Residue indices (Uniprot)	28-162 (1-162)
Uniprot ID	A0T0N2 ￫UniprotKB
label_asym_ids of heme	YF
Available structure	PDB

Chain I heme
auth_asym_id	F
Residue indices (Uniprot)	13-43 (1-43)
Uniprot ID	A0T0U1 ￫UniprotKB
label_asym_ids of heme	BF
Available structure	PDB

Chain IA
auth_asym_id	W
Residue indices (Uniprot)	178-231 (178-231)
Uniprot ID	B8C8Y3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain J heme
auth_asym_id	f
Residue indices (Uniprot)	13-43 (1-43)
Uniprot ID	A0T0U1 ￫UniprotKB
label_asym_ids of heme	AF
Available structure	PDB

Chain JA
auth_asym_id	w
Residue indices (Uniprot)	178-231 (178-231)
Uniprot ID	B8C8Y3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain K
auth_asym_id	G
Residue indices (Uniprot)	57-176 (1-176)
Uniprot ID	B8CC14 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain KA
auth_asym_id	X
Residue indices (Uniprot)	1-35 (1-38)
Uniprot ID	A0T0N4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain L
auth_asym_id	g
Residue indices (Uniprot)	57-176 (1-176)
Uniprot ID	B8CC14 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain LA
auth_asym_id	x
Residue indices (Uniprot)	1-35 (1-38)
Uniprot ID	A0T0N4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain M
auth_asym_id	H
Residue indices (Uniprot)	2-66 (1-66)
Uniprot ID	A0T0P8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain MA
auth_asym_id	Z
Residue indices (Uniprot)	1-61 (1-61)
Uniprot ID	A0T0T3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain N
auth_asym_id	h
Residue indices (Uniprot)	2-66 (1-66)
Uniprot ID	A0T0P8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain NA
auth_asym_id	z
Residue indices (Uniprot)	1-61 (1-61)
Uniprot ID	A0T0T3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain O
auth_asym_id	I
Residue indices (Uniprot)	1-34 (1-34)
Uniprot ID	A0T0U9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain OA
auth_asym_id	3
Residue indices (Uniprot)	31-250 (31-250)
Uniprot ID	B8BUU4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain P
auth_asym_id	i
Residue indices (Uniprot)	1-34 (1-34)
Uniprot ID	A0T0U9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain PA
auth_asym_id	4
Residue indices (Uniprot)	33-195 (1-196)
Uniprot ID	B8BVI1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Q
auth_asym_id	J
Residue indices (Uniprot)	6-38 (1-39)
Uniprot ID	A0T0T9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain QA
auth_asym_id	5
Residue indices (Uniprot)	33-192 (1-192)
Uniprot ID	B8BX92 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain R
auth_asym_id	j
Residue indices (Uniprot)	6-38 (1-39)
Uniprot ID	A0T0T9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain RA
auth_asym_id	6
Residue indices (Uniprot)	32-199 (1-199)
Uniprot ID	B8CEV5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain S
auth_asym_id	K
Residue indices (Uniprot)	8-44 (1-44)
Uniprot ID	A0T0S8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain SA
auth_asym_id	7
Residue indices (Uniprot)	35-199 (1-199)
Uniprot ID	B5YLU3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain T
auth_asym_id	k
Residue indices (Uniprot)	8-44 (1-44)
Uniprot ID	A0T0S8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain TA
auth_asym_id	a
Residue indices (Uniprot)	11-343 (11-343)
Uniprot ID	A0T0W2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain U
auth_asym_id	L
Residue indices (Uniprot)	2-38 (1-38)
Uniprot ID	A0T0U0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain UA
auth_asym_id	b
Residue indices (Uniprot)	2-479 (1-509)
Uniprot ID	A0T0P5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain V
auth_asym_id	l
Residue indices (Uniprot)	2-38 (1-38)
Uniprot ID	A0T0U0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain VA
auth_asym_id	Y
Residue indices (Uniprot)	1-34 (1-34)
Uniprot ID	A0T0T2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain W
auth_asym_id	M
Residue indices (Uniprot)	72-112 (1-113)
Uniprot ID	B8BYH2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain WA
auth_asym_id	y
Residue indices (Uniprot)	1-34 (1-34)
Uniprot ID	A0T0T2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain X
auth_asym_id	m
Residue indices (Uniprot)	72-112 (1-113)
Uniprot ID	B8BYH2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain XA
auth_asym_id	Q
Residue indices (Uniprot)	56-211 (1-211)
Uniprot ID	B8BSY9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Y
auth_asym_id	n
Residue indices (Uniprot)	1-30 (-)
Nonstandard amino acids	UNK
Unknown residues	Included
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain YA
auth_asym_id	q
Residue indices (Uniprot)	56-211 (1-211)
Uniprot ID	B8BSY9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Z
auth_asym_id	N
Residue indices (Uniprot)	1-30 (-)
Nonstandard amino acids	UNK
Unknown residues	Included
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain ZA
auth_asym_id	0
Residue indices (Uniprot)	35-199 (1-199)
Uniprot ID	B5YLU3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB