Danish

PDB ID: pdb_00008j5o

Cryo-EM structure of native RC-LH complex from Roseiflexus castenholzii at 100lux
Experimental method: ELECTRON MICROSCOPY
Resolution: unavailable
Deposition date: 2023-04-24

Number of assemblies: 1

Assembly ID: 0 (author_defined_assembly)
Structural data	modeled
Oligomeric count	36
label_asym_ids of protein	36 chains (1 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z
label_asym_ids of heme	OB PB QB RB
label_asym_ids of the others	show AB (BCL), AC (KGD), AD (BCL), BB (BCL), BC (BCL), BD (BPH), CB (KGD), CC (BCL), CD (MQE), DB (BCL), DC (BCL), DD (BCL), EB (KGD), EC (KGD), ED (BCL), FB (BCL), FC (BCL), FD (BCL), GB (BCL), GC (KGD), GD (KGD), HB (KGD), HC (BCL), HD (BCL), IB (BCL), IC (BCL), ID (KGD), JB (BCL), JC (KGD), JD (BCL), KA (BCL), KB (KGD), KC (BCL), KD (BCL), LA (BCL), LB (BCL), LC (KGD), LD (KGD), MA (KGD), MB (BCL), MC (KGD), MD (BCL), NA (KGD), NB (KGD), NC (BCL), ND (KGD), OA (BCL), OC (BCL), OD (BCL), PA (KGD), PC (KGD), PD (BCL), QA (KGD), QC (BCL), QD (KGD), RA (BCL), RC (BCL), RD (KGD), SA (BCL), SB (KGD), SC (BPH), SD (BCL), TA (KGD), TB (KGD), TC (FE), TD (BCL), UA (BCL), UB (PGV), UC (MQE), UD (BCL), VA (BCL), VB (BCL), VC (BPH), VD (KGD), WA (BCL), WB (KGD), WC (PGV), WD (BCL), XA (KGD), XB (KGD), XC (PGV), XD (BCL), YA (BCL), YB (BCL), YC (PGV), YD (BCL), ZA (KGD), ZB (BCL), ZC (MQE)

Each chain information

Showing all 36 chains (1 with heme). Show only chains with heme

Chain A
auth_asym_id	0
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain AA
auth_asym_id	Q
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain B
auth_asym_id	1
Residue indices (Uniprot)	7-40 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain BA
auth_asym_id	R
Residue indices (Uniprot)	4-41 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain C
auth_asym_id	2
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain CA
auth_asym_id	S
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain D
auth_asym_id	3
Residue indices (Uniprot)	4-40 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain DA
auth_asym_id	T
Residue indices (Uniprot)	4-41 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain E
auth_asym_id	4
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain EA
auth_asym_id	U
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain F
auth_asym_id	5
Residue indices (Uniprot)	4-41 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain FA
auth_asym_id	V
Residue indices (Uniprot)	4-40 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain G
auth_asym_id	6
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain GA
auth_asym_id	W
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain H
auth_asym_id	7
Residue indices (Uniprot)	4-40 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain HA
auth_asym_id	X
Residue indices (Uniprot)	1-26 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain I
auth_asym_id	8
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain IA
auth_asym_id	Y
Residue indices (Uniprot)	1-32 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain J
auth_asym_id	9
Residue indices (Uniprot)	4-40 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain JA
auth_asym_id	Z
Residue indices (Uniprot)	12-58 (1-63)
Uniprot ID	A0AAJ6N6C1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain K
auth_asym_id	A
Residue indices (Uniprot)	4-41 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain L
auth_asym_id	B
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain M heme
auth_asym_id	C
Residue indices (Uniprot)	6-320 (1-320)
Uniprot ID	A7NQE7 ￫UniprotKB
label_asym_ids of heme	OB , PB , QB , RB
Available structure	PDB

Chain N
auth_asym_id	D
Residue indices (Uniprot)	4-41 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain O
auth_asym_id	E
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain P
auth_asym_id	F
Residue indices (Uniprot)	4-40 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Q
auth_asym_id	G
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain R
auth_asym_id	H
Residue indices (Uniprot)	4-41 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain S
auth_asym_id	I
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain T
auth_asym_id	J
Residue indices (Uniprot)	4-40 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain U
auth_asym_id	K
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain V
auth_asym_id	L
Residue indices (Uniprot)	7-315 (1-315)
Missing residues	19GLU-28ALA
Structural gaps	Exists
Uniprot ID	A7NQE8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.11 Å

Chain W
auth_asym_id	M
Residue indices (Uniprot)	335-640 (335-641)
Uniprot ID	A7NQE8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain X
auth_asym_id	N
Residue indices (Uniprot)	4-40 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Y
auth_asym_id	O
Residue indices (Uniprot)	7-55 (1-55)
Mutations (UniProt numbering)	E22Q
Uniprot ID	A7NQE9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Z
auth_asym_id	P
Residue indices (Uniprot)	4-40 (1-42)
Uniprot ID	Q83XD1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB