Danish

PDB ID: pdb_00008k5o

Cryo-EM structure of the RC-LH core comples from Halorhodospira halochloris
Experimental method: ELECTRON MICROSCOPY
Resolution: unavailable
Deposition date: 2023-07-22

Number of assemblies: 1

Assembly ID: 0 (author_defined_assembly)
Structural data	modeled
Oligomeric count	56
label_asym_ids of protein	56 chains (1 with heme) A, AA, AB, B, BA, BB, C, CA, CB, D, DA, DB, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, OA, P, PA, Q, QA, R, RA, S, SA, T, TA, U, UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA
label_asym_ids of heme	EB FB GB HB
label_asym_ids of the others	show AC (MQ8), AD (UNL), AE (UNL), AF (PGV), AG (UNL), AH (UNL), AI (UNL), BC (MQ8), BD (UNL), BE (PGV), BF (A1L), BG (PEF), BH (PGV), BI (UNL), CC (PGV), CD (PGV), CE (A1L), CF (A1L), CG (A1L), CH (A1L), CI (UNL), DC (PGV), DD (A1L), DE (A1L), DF (PGV), DG (A1L), DH (A1L), DI (PGV), EC (CDL), ED (A1L), EE (UNL), EF (A1L), EG (PGV), EH (PGV), EI (A1L), FC (CDL), FD (PGV), FE (UNL), FF (A1L), FG (UNL), FH (A1L), FI (A1L), GC (UNL), GD (PGV), GE (UNL), GF (UNL), GG (UNL), GH (A1L), GI (UNL), HC (UNL), HD (A1L), HE (PGV), HF (UNL), HG (UNL), HH (UNL), HI (PGV), IB (PGV), IC (UNL), ID (A1L), IE (A1L), IF (A1L), IG (A1L), IH (UNL), II (A1L), JB (LHG), JC (PGV), JD (UNL), JE (A1L), JF (A1L), JG (A1L), JH (UNL), JI (A1L), KB (PGV), KC (PGV), KD (UNL), KE (UNL), KF (A1L), KG (A1L), KH (PGV), KI (UNL), LB (PGV), LC (PGV), LD (UNL), LE (PGV), LF (A1L), LG (PGV), LH (A1L), LI (UNL), MB (A1L), MC (CDL), MD (PGV), ME (A1L), MF (PGV), MG (PGV), MH (A1L), MI (UNL), NB (A1L), NC (PGV), ND (A1L), NE (A1L), NF (A1L), NG (A1L), NH (PGV), NI (PGV), OB (A1L), OC (PGV), OD (A1L), OE (UNL), OF (A1L), OG (UNL), OH (A1L), OI (UNL), PB (UQ8), PC (A1L), PD (UNL), PE (UNL), PF (UNL), PG (UNL), PH (A1L), PI (PGV), QB (PGV), QC (UNL), QD (UNL), QE (UNL), QF (PGV), QG (UNL), QH (UNL), QI (PGV), RB (PGV), RC (PGV), RD (PGV), RE (PGV), RF (A1L), RG (PGV), RH (UNL), SB (UNL), SC (LYC), SD (A1L), SE (A1L), SF (A1L), SG (A1L), SH (UNL), TB (UNL), TC (A1L), TD (A1L), TE (A1L), TF (UNL), TG (A1L), TH (PGV), UB (PGV), UC (A1L), UD (UNL), UE (PGV), UF (UNL), UG (A1L), UH (A1L), VB (PGV), VC (A1L), VD (UNL), VE (A1L), VF (PGV), VG (BGL), VH (A1L), WB (FE), WC (A1L), WD (UNL), WE (A1L), WF (A1L), WG (PGV), WH (BGL), XB (A1L), XC (PGV), XD (PGV), XE (UNL), XF (A1L), XG (A1L), XH (PGV), YB (A1L), YC (A1L), YD (A1L), YE (UNL), YF (PGV), YG (UNL), YH (A1L), ZB (A1L), ZC (UNL), ZD (A1L), ZE (UNL), ZF (PGV), ZG (UNL), ZH (A1L)

Each chain information

Showing all 56 chains (1 with heme). Show only chains with heme

Chain A heme
auth_asym_id	C
Residue indices (Uniprot)	25-370 (1-372)
Uniprot ID	A0A0X8X829 ￫UniprotKB
label_asym_ids of heme	HB , GB , FB , EB
Available structure	PDB

Chain AA
auth_asym_id	y
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain AB
auth_asym_id	r
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain B
auth_asym_id	L
Residue indices (Uniprot)	2-276 (1-279)
Uniprot ID	A0A0X8XAH6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain BA
auth_asym_id	6
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain BB
auth_asym_id	p
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain C
auth_asym_id	M
Residue indices (Uniprot)	2-319 (1-320)
Uniprot ID	A0A0X8X847 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain CA
auth_asym_id	7
Residue indices (Uniprot)	7-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain CB
auth_asym_id	2
Residue indices (Uniprot)	2-30 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain D
auth_asym_id	H
Residue indices (Uniprot)	1-274 (1-274)
Missing residues	196PRO-201LYS
Structural gaps	Exists
Uniprot ID	A0A0X8X838 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.13 Å

Chain DA
auth_asym_id	5
Residue indices (Uniprot)	2-27 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain DB
auth_asym_id	9
Residue indices (Uniprot)	5-33 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain E
auth_asym_id	4
Residue indices (Uniprot)	5-76 (1-105)
Uniprot ID	A0A110B4Z6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain EA
auth_asym_id	F
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain F
auth_asym_id	3
Residue indices (Uniprot)	1-51 (1-65)
Uniprot ID	A0A120MZP7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain FA
auth_asym_id	G
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain G
auth_asym_id	w
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain GA
auth_asym_id	8
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain H
auth_asym_id	x
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain HA
auth_asym_id	K
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain I
auth_asym_id	v
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain IA
auth_asym_id	N
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain J
auth_asym_id	Y
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain JA
auth_asym_id	I
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain K
auth_asym_id	Z
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain KA
auth_asym_id	P
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain L
auth_asym_id	X
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain LA
auth_asym_id	Q
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain M
auth_asym_id	b
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain MA
auth_asym_id	O
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain N
auth_asym_id	c
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain NA
auth_asym_id	S
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain O
auth_asym_id	a
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain OA
auth_asym_id	T
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain P
auth_asym_id	k
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain PA
auth_asym_id	R
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain Q
auth_asym_id	l
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain QA
auth_asym_id	V
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain R
auth_asym_id	j
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain RA
auth_asym_id	W
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain S
auth_asym_id	n
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain SA
auth_asym_id	U
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain T
auth_asym_id	o
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain TA
auth_asym_id	e
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain U
auth_asym_id	m
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain UA
auth_asym_id	f
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain V
auth_asym_id	t
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain VA
auth_asym_id	d
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain W
auth_asym_id	u
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain WA
auth_asym_id	h
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain X
auth_asym_id	s
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain XA
auth_asym_id	i
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Y
auth_asym_id	z
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain YA
auth_asym_id	g
Residue indices (Uniprot)	2-29 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain Z
auth_asym_id	1
Residue indices (Uniprot)	4-65 (1-86)
Uniprot ID	A0A0X8X9B2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain ZA
auth_asym_id	q
Residue indices (Uniprot)	1-63 (1-65)
Uniprot ID	A0A0X8XBE4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB