Danish
PDB ID:  pdb_00008q1b
  • III2-IV1 respiratory supercomplex from S. pombe
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: unavailable
  • Deposition date: 2023-07-31
Number of assemblies:  1
Assembly ID:  0  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 33
label_asym_ids of protein
33 chains (5 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z
label_asym_ids of heme DB JB KB MA NA PA YA ZA
label_asym_ids of the others
show AB (U10), BB (PEF), CB (PEF), EB (PEF), FB (FES), GB (CDL), HA (ZN), HB (CDL), IA (CDL), IB (PCF), JA (PCF), KA (PEF), LA (PCF), LB (CU), MB (CA), NB (PEF), OA (U10), OB (MG), PB (PEF), QA (PEF), QB (CUA), RA (FES), RB (PEF), SA (CDL), SB (ZN), TA (CDL), TB (PEF), UA (PEF), VA (ZN), WA (CDL), XA (PCF)
Each chain information

Showing all 33 chains (5 with heme). Show only chains with heme

Chain A  
auth_asym_id A
Residue indices (Uniprot) 15-457 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain AA  
auth_asym_id g
Residue indices (Uniprot) 2-58 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain B  
auth_asym_id B
Residue indices (Uniprot) 21-426 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain BA  
auth_asym_id h
Residue indices (Uniprot) 22-66 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 1-387 (-)
Uniprot ID Unavailable
label_asym_ids of heme NA ,  MA
Available structure PDB
Chain CA  
auth_asym_id i
Residue indices (Uniprot) 2-56 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 63-307 (-)
Uniprot ID Unavailable
label_asym_ids of heme PA
Available structure PDB
Chain DA  
auth_asym_id j
Residue indices (Uniprot) 12-86 (-)
Uniprot ID Unavailable
S-S bonds 33:65,43:54
label_asym_ids of heme None
Available structure PDB
Chain E  
auth_asym_id E
Residue indices (Uniprot) 47-228 (-)
Uniprot ID Unavailable
S-S bonds 177:193
label_asym_ids of heme None
Available structure PDB
Chain EA  
auth_asym_id k
Residue indices (Uniprot) 38-125 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain F  
auth_asym_id F
Residue indices (Uniprot) 149-214 (-)
Uniprot ID Unavailable
S-S bonds 157:204,163:200,173:190
label_asym_ids of heme None
Available structure PDB
Chain FA  
auth_asym_id l
Residue indices (Uniprot) 97-165 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id G
Residue indices (Uniprot) 1-122 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain GA  
auth_asym_id m
Residue indices (Uniprot) 1-26 (-)
Nonstandard amino acids UNK Structure of UNKUNK
Unknown residues Included
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id H
Residue indices (Uniprot) 2-88 (-)
Missing residues 63PRO-63PRO
Structural gaps Exists
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain I  
auth_asym_id I
Residue indices (Uniprot) 1-60 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id J
Residue indices (Uniprot) 2-78 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id L
Residue indices (Uniprot) 15-457 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id M
Residue indices (Uniprot) 21-426 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain M heme  
auth_asym_id N
Residue indices (Uniprot) 1-387 (-)
Uniprot ID Unavailable
label_asym_ids of heme ZA ,  YA
Available structure PDB
Chain N heme  
auth_asym_id O
Residue indices (Uniprot) 63-307 (-)
Uniprot ID Unavailable
label_asym_ids of heme DB
Available structure PDB
Chain O  
auth_asym_id P
Residue indices (Uniprot) 47-228 (-)
Uniprot ID Unavailable
S-S bonds 177:193
label_asym_ids of heme None
Available structure PDB
Chain P  
auth_asym_id Q
Residue indices (Uniprot) 149-214 (-)
Uniprot ID Unavailable
S-S bonds 157:204,163:200,173:190
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id R
Residue indices (Uniprot) 1-122 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain R  
auth_asym_id S
Residue indices (Uniprot) 2-88 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id T
Residue indices (Uniprot) 1-60 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id U
Residue indices (Uniprot) 2-78 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain U heme  
auth_asym_id a
Residue indices (Uniprot) 2-538 (-)
Uniprot ID Unavailable
label_asym_ids of heme KB ,  JB
Available structure PDB
Chain V  
auth_asym_id b
Residue indices (Uniprot) 10-247 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain W  
auth_asym_id c
Residue indices (Uniprot) 2-269 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain X  
auth_asym_id d
Residue indices (Uniprot) 39-159 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain Y  
auth_asym_id e
Residue indices (Uniprot) 39-183 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB
Chain Z  
auth_asym_id f
Residue indices (Uniprot) 40-139 (-)
Uniprot ID Unavailable
label_asym_ids of heme None
Available structure PDB