Danish

PDB ID: pdb_00008z83

Photosynthetic LH1-RC complex from the purple bacterium Halorhodospira halophila
Experimental method: ELECTRON MICROSCOPY
Resolution: unavailable
Deposition date: 2024-04-21

Number of assemblies: 1

Assembly ID: 0 (author_and_software_defined_assembly)
Structural data	PDB
Oligomeric count	36
label_asym_ids of protein	36 chains (1 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z
label_asym_ids of heme	KA LA MA NA
label_asym_ids of the others	show AB (PGV), AC (BCL), AD (BCL), AE (LMT), AF (BCL), BB (PGV), BC (BCL), BD (BCL), BE (BCL), BF (PGV), CB (BCL), CC (BCL), CD (PGV), CE (PGV), CF (CRT), DB (BCL), DC (PGV), DD (PGV), DE (CRT), DF (BCL), EB (CDL), EC (PGV), ED (LMT), EE (BCL), EF (PGV), FB (FE), FC (CDL), FD (BCL), FE (PGV), FF (LMT), GB (CDL), GC (LMT), GD (CRT), GE (PGV), GF (BCL), HB (BCL), HC (BCL), HD (BCL), HE (PGV), HF (BCL), IB (BPH), IC (CRT), ID (PGV), IE (BCL), IF (PGV), JB (MQ8), JC (BCL), JD (PGV), JE (BCL), JF (BCL), KB (CRT), KC (PGV), KD (BCL), KE (BCL), KF (PGV), LB (CDL), LC (PGV), LD (BCL), LE (PGV), LF (PGV), MB (CDL), MC (PGV), MD (BCL), ME (PGV), NB (CDL), NC (BCL), ND (PGV), NE (PGV), OA (MG), OB (CDL), OC (BCL), OD (CDL), OE (BCL), PA (Z41), PB (PGV), PC (BCL), PD (BCL), PE (CRT), QA (PLM), QB (CDL), QC (PGV), QD (PGV), QE (BCL), RA (LMT), RB (PGV), RC (LMT), RD (CRT), RE (PGV), SA (PGV), SB (PGV), SC (BCL), SD (BCL), SE (PGV), TA (LMT), TB (LMT), TC (PGV), TD (PGV), TE (LMT), UA (BCL), UB (LMT), UC (CRT), UD (PGV), UE (BCL), VA (BPH), VB (BCL), VC (BCL), VD (BCL), VE (BCL), WA (UQ8), WB (CRT), WC (PGV), WD (BCL), WE (BCL), XA (PGV), XB (BCL), XC (PGV), XD (BCL), XE (PGV), YA (UQ8), YB (PGV), YC (LMT), YD (PGV), YE (LMT), ZA (UQ8), ZB (PGV), ZC (BCL), ZD (BCL), ZE (LMT)

Each chain information

Showing all 36 chains (1 with heme). Show only chains with heme

Chain A heme
auth_asym_id	C
Residue indices (Uniprot)	26-358 (1-362)
Mutations (UniProt numbering)	S33T, T47N, K72R, T84D, A103S, E143D, E172T, L173P, F175V, V177M, H178A, D183T, Q184M, V193T, G194E, F195Y, V202A, N223H, G239S, D246A, V269E, M289I, D298E, E341A, E354D, D360N
Uniprot ID	A1WXF5 ￫UniprotKB
label_asym_ids of heme	NA , MA , LA , KA
Available structure	PDB

Chain AA
auth_asym_id	1
Residue indices (Uniprot)	1-46 (1-67)
Mutations (UniProt numbering)	S37N, E42Q, N48D, E57D
Uniprot ID	A1WXF8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain B
auth_asym_id	L
Residue indices (Uniprot)	2-275 (1-276)
Mutations (UniProt numbering)	A99T, S205P, V220I, A241G
Uniprot ID	A1WXF7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain BA
auth_asym_id	2
Residue indices (Uniprot)	9-53 (1-74)
Mutations (UniProt numbering)	V28I
Uniprot ID	A1WXF9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain C
auth_asym_id	M
Residue indices (Uniprot)	2-319 (1-323)
Mutations (UniProt numbering)	S34A, L65I, L66V, I84L, W86F, I126V, W130F, V131A, D236E
Uniprot ID	A1WXF6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain CA
auth_asym_id	3
Residue indices (Uniprot)	1-46 (1-64)
Uniprot ID	A1WWW5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain D
auth_asym_id	H
Residue indices (Uniprot)	1-278 (1-278)
Mutations (UniProt numbering)	T69V, A97E, V118L, A135G, N137K, A141C, R158A, Q163E, L164I, D171Y, T179K, S210G, G226S, K236Q, S247A, Y262F
Uniprot ID	A1WXI3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain DA
auth_asym_id	4
Residue indices (Uniprot)	7-53 (1-75)
Uniprot ID	A1WWW6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain E
auth_asym_id	A
Residue indices (Uniprot)	1-46 (1-64)
Uniprot ID	A1WWW5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain EA
auth_asym_id	5
Residue indices (Uniprot)	1-46 (1-67)
Mutations (UniProt numbering)	S37N, E42Q, N48D, E57D
Uniprot ID	A1WXF8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain F
auth_asym_id	B
Residue indices (Uniprot)	6-53 (1-75)
Uniprot ID	A1WWW6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain FA
auth_asym_id	6
Residue indices (Uniprot)	9-53 (1-74)
Mutations (UniProt numbering)	V28I
Uniprot ID	A1WXF9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain G
auth_asym_id	D
Residue indices (Uniprot)	1-46 (1-67)
Mutations (UniProt numbering)	S37N, E42Q, N48D, E57D
Uniprot ID	A1WXF8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain GA
auth_asym_id	7
Residue indices (Uniprot)	1-46 (1-64)
Uniprot ID	A1WWW5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain H
auth_asym_id	E
Residue indices (Uniprot)	9-53 (1-74)
Mutations (UniProt numbering)	V28I
Uniprot ID	A1WXF9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain HA
auth_asym_id	8
Residue indices (Uniprot)	7-53 (1-75)
Uniprot ID	A1WWW6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain I
auth_asym_id	F
Residue indices (Uniprot)	1-46 (1-64)
Uniprot ID	A1WWW5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain IA
auth_asym_id	9
Residue indices (Uniprot)	1-46 (1-67)
Mutations (UniProt numbering)	S37N, E42Q, N48D, E57D
Uniprot ID	A1WXF8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain J
auth_asym_id	G
Residue indices (Uniprot)	7-53 (1-75)
Uniprot ID	A1WWW6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain JA
auth_asym_id	0
Residue indices (Uniprot)	9-53 (1-74)
Mutations (UniProt numbering)	V28I
Uniprot ID	A1WXF9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain K
auth_asym_id	I
Residue indices (Uniprot)	1-46 (1-67)
Mutations (UniProt numbering)	S37N, E42Q, N48D, E57D
Uniprot ID	A1WXF8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain L
auth_asym_id	J
Residue indices (Uniprot)	9-53 (1-74)
Mutations (UniProt numbering)	V28I
Uniprot ID	A1WXF9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain M
auth_asym_id	K
Residue indices (Uniprot)	1-46 (1-64)
Uniprot ID	A1WWW5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain N
auth_asym_id	N
Residue indices (Uniprot)	7-53 (1-75)
Uniprot ID	A1WWW6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain O
auth_asym_id	O
Residue indices (Uniprot)	1-46 (1-67)
Mutations (UniProt numbering)	S37N, E42Q, N48D, E57D
Uniprot ID	A1WXF8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain P
auth_asym_id	P
Residue indices (Uniprot)	9-53 (1-74)
Mutations (UniProt numbering)	V28I
Uniprot ID	A1WXF9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Q
auth_asym_id	Q
Residue indices (Uniprot)	1-46 (1-64)
Uniprot ID	A1WWW5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain R
auth_asym_id	R
Residue indices (Uniprot)	7-53 (1-75)
Uniprot ID	A1WWW6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain S
auth_asym_id	S
Residue indices (Uniprot)	1-46 (1-67)
Mutations (UniProt numbering)	S37N, E42Q, N48D, E57D
Uniprot ID	A1WXF8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain T
auth_asym_id	T
Residue indices (Uniprot)	9-53 (1-74)
Mutations (UniProt numbering)	V28I
Uniprot ID	A1WXF9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain U
auth_asym_id	U
Residue indices (Uniprot)	1-46 (1-64)
Uniprot ID	A1WWW5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain V
auth_asym_id	V
Residue indices (Uniprot)	7-53 (1-75)
Uniprot ID	A1WWW6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain W
auth_asym_id	W
Residue indices (Uniprot)	1-46 (1-67)
Mutations (UniProt numbering)	S37N, E42Q, N48D, E57D
Uniprot ID	A1WXF8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain X
auth_asym_id	X
Residue indices (Uniprot)	9-53 (1-74)
Mutations (UniProt numbering)	V28I
Uniprot ID	A1WXF9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Y
auth_asym_id	Y
Residue indices (Uniprot)	1-46 (1-64)
Uniprot ID	A1WWW5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Z
auth_asym_id	Z
Residue indices (Uniprot)	6-53 (1-75)
Uniprot ID	A1WWW6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB