Danish

PDB ID: pdb_00008zk2

Cryo-EM structure of photosynthetic LH1-RC core complex of Roseospirillum parvum
Experimental method: ELECTRON MICROSCOPY
Resolution: unavailable
Deposition date: 2024-05-15

Number of assemblies: 1

Assembly ID: 0 (author_defined_assembly)
Structural data	modeled
Oligomeric count	36
label_asym_ids of protein	36 chains (1 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z
label_asym_ids of heme	KA LA MA NA
label_asym_ids of the others	show AB (LMT), AC (BCL), AD (PGV), AE (BCL), BB (8K6), BC (CRT), BD (BCL), BE (8K6), CB (PGV), CC (BCL), CD (BCL), CE (BCL), DB (FE), DC (BCL), DD (BCL), DE (CRT), EB (BCL), EC (BCL), ED (BCL), EE (BCL), FB (BCL), FC (BCL), FD (CRT), FE (BCL), GB (BPH), GC (CRT), GD (BCL), GE (8K6), HB (MQ8), HC (BCL), HD (BCL), HE (BCL), IB (CRT), IC (BCL), ID (8K6), IE (BCL), JB (PGV), JC (8K6), JD (8K6), JE (BCL), KB (PGV), KC (8K6), KD (BCL), KE (BCL), LB (8K6), LC (BCL), LD (CRT), LE (CRT), MB (PGV), MC (CRT), MD (BCL), ME (CRT), NB (PGV), NC (BCL), ND (BCL), NE (BCL), OA (MG), OB (8K6), OC (BCL), OD (8K6), OE (BCL), PA (MG), PB (8K6), PC (CRT), PD (BCL), PE (8K6), QA (MG), QB (8K6), QC (8K6), QD (CRT), QE (8K6), RA (PGV), RB (8K6), RC (BCL), RD (BCL), SA (8K6), SB (MG), SC (BCL), SD (CRT), TA (BCL), TB (BCL), TC (BCL), TD (PGV), UA (BCL), UB (CRT), UC (CRT), UD (BCL), VA (BPH), VB (BCL), VC (8K6), VD (CRT), WA (8K6), WB (BCL), WC (BCL), WD (BCL), XA (8K6), XB (CRT), XC (BCL), XD (BCL), YA (8K6), YB (BCL), YC (BCL), YD (BCL), ZA (8K6), ZB (BCL), ZC (CRT), ZD (BCL)

Each chain information

Showing all 36 chains (1 with heme). Show only chains with heme

Chain A heme
auth_asym_id	C
Residue indices (Uniprot)	20-361 (1-362)
Uniprot ID	Q6XBJ5 ￫UniprotKB
label_asym_ids of heme	NA , MA , LA , KA
Available structure	PDB

Chain AA
auth_asym_id	a
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain B
auth_asym_id	L
Residue indices (Uniprot)	2-274 (1-275)
Uniprot ID	Q6XBJ7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain BA
auth_asym_id	b
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain C
auth_asym_id	M
Residue indices (Uniprot)	34-320 (1-323)
Uniprot ID	Q6XBJ6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain CA
auth_asym_id	c
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain D
auth_asym_id	H
Residue indices (Uniprot)	1-254 (1-254)
Missing residues	184GLY-192GLY
Structural gaps	Exists
Uniprot ID	A0A1G7WCA0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.19 Å

Chain DA
auth_asym_id	d
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain E
auth_asym_id	B
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain EA
auth_asym_id	e
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain F
auth_asym_id	A
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain FA
auth_asym_id	f
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain G
auth_asym_id	D
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain GA
auth_asym_id	g
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain H
auth_asym_id	E
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain HA
auth_asym_id	h
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain I
auth_asym_id	F
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain IA
auth_asym_id	i
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain J
auth_asym_id	G
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain JA
auth_asym_id	j
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain K
auth_asym_id	I
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain L
auth_asym_id	J
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain M
auth_asym_id	K
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain N
auth_asym_id	N
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain O
auth_asym_id	O
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain P
auth_asym_id	P
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Q
auth_asym_id	Q
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain R
auth_asym_id	R
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain S
auth_asym_id	S
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain T
auth_asym_id	T
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain U
auth_asym_id	U
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain V
auth_asym_id	V
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain W
auth_asym_id	W
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain X
auth_asym_id	X
Residue indices (Uniprot)	1-53 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Y
auth_asym_id	Y
Residue indices (Uniprot)	9-57 (1-68)
Uniprot ID	Q6XBJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Z
auth_asym_id	Z
Residue indices (Uniprot)	6-51 (1-67)
Uniprot ID	Q6XBJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB