Danish
PDB ID:  pdb_00009g9t
  • Cryo-EM structure of the Toxoplasma gondii respiratory chain complex III inhibited by ELQ-300
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: unavailable
  • Deposition date: 2024-07-25
Number of assemblies:  1
Assembly ID:  0  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 24
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (A1IStructure of A1IA1I ), AB (CDLStructure of CDLCDL ), BB (CDLStructure of CDLCDL ), CB (CDLStructure of CDLCDL ), DA (MGStructure of MGMG ), DB (PC1Structure of PC1PC1 ), FA (PC1Structure of PC1PC1 ), GA (CDLStructure of CDLCDL ), HA (CDLStructure of CDLCDL ), IA (CDLStructure of CDLCDL ), JA (ZNStructure of ZNZN ), KA (CDLStructure of CDLCDL ), LA (CDLStructure of CDLCDL ), MA (CDLStructure of CDLCDL ), NA (CDLStructure of CDLCDL ), OA (CDLStructure of CDLCDL ), PA (CDLStructure of CDLCDL ), QA (A1IStructure of A1IA1I ), RA (A1IStructure of A1IA1I ), UA (MGStructure of MGMG ), WA (CDLStructure of CDLCDL ), XA (CDLStructure of CDLCDL ), Y (CDLStructure of CDLCDL ), YA (CDLStructure of CDLCDL ), Z (A1IStructure of A1IA1I ), ZA (ZNStructure of ZNZN )
Each chain information

Showing all 24 chains (4 with heme). Show only chains with heme

Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 9-368 (10-368)
Mutations (UniProt numbering)
Uniprot ID S8EQL3 ￫UniprotKB
label_asym_ids of heme CA ,  BA
Available structure PDB
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 156-398 (1-398)
Uniprot ID A0A125YTU2 ￫UniprotKB
label_asym_ids of heme EA
Available structure PDB
Chain C  
auth_asym_id C
Residue indices (Uniprot) 160-364 (1-487)
Uniprot ID A0A125YZC1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id D
Residue indices (Uniprot) 48-509 (1-509)
Uniprot ID A0A125YS93 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain E  
auth_asym_id E
Residue indices (Uniprot) 67-561 (1-563)
Mutations (UniProt numbering)
Missing residues 395GLY-404LYS
Structural gaps Exists
Uniprot ID S8GED8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain F  
auth_asym_id F
Residue indices (Uniprot) 2-89 (1-89)
Uniprot ID A0A125YU99 ￫UniprotKB
S-S bonds 37:79,41:75
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id G
Residue indices (Uniprot) 3-194 (1-234)
Uniprot ID A0A125YYJ5 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id H
Residue indices (Uniprot) 27-122 (1-122)
Uniprot ID A0A125YW21 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id I
Residue indices (Uniprot) 33-124 (1-128)
Uniprot ID A0A125YZ21 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id J
Residue indices (Uniprot) 2-75 (1-80)
Uniprot ID A0A125YPC9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id K
Residue indices (Uniprot) 65-141 (1-141)
Uniprot ID A0A125YZP0 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id L
Residue indices (Uniprot) 53-85 (1-109)
Mutations (UniProt numbering)
Uniprot ID A0A125YYV1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain M heme  
auth_asym_id a
Residue indices (Uniprot) 9-368 (10-368)
Mutations (UniProt numbering)
Uniprot ID S8EQL3 ￫UniprotKB
label_asym_ids of heme TA ,  SA
Available structure PDB
Chain N heme  
auth_asym_id b
Residue indices (Uniprot) 156-398 (1-398)
Uniprot ID A0A125YTU2 ￫UniprotKB
label_asym_ids of heme VA
Available structure PDB
Chain O  
auth_asym_id c
Residue indices (Uniprot) 160-364 (1-487)
Uniprot ID A0A125YZC1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain P  
auth_asym_id d
Residue indices (Uniprot) 48-509 (1-509)
Uniprot ID A0A125YS93 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id e
Residue indices (Uniprot) 67-561 (1-563)
Mutations (UniProt numbering)
Missing residues 395GLY-404LYS
Structural gaps Exists
Uniprot ID S8GED8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.08 Å
Chain R  
auth_asym_id f
Residue indices (Uniprot) 2-89 (1-89)
Uniprot ID A0A125YU99 ￫UniprotKB
S-S bonds 37:79,41:75
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id g
Residue indices (Uniprot) 3-194 (1-234)
Uniprot ID A0A125YYJ5 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id h
Residue indices (Uniprot) 27-122 (1-122)
Uniprot ID A0A125YW21 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain U  
auth_asym_id i
Residue indices (Uniprot) 33-124 (1-128)
Uniprot ID A0A125YZ21 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain V  
auth_asym_id j
Residue indices (Uniprot) 2-75 (1-80)
Uniprot ID A0A125YPC9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain W  
auth_asym_id k
Residue indices (Uniprot) 65-141 (1-141)
Uniprot ID A0A125YZP0 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain X  
auth_asym_id l
Residue indices (Uniprot) 53-85 (1-109)
Mutations (UniProt numbering)
Uniprot ID A0A125YYV1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB