Danish
PDB ID:  pdb_00009g9z
  • Respiratory supercomplex CI1-CIII2-CIV1 (respirasome) from alphaproteobacterium
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: unavailable
  • Deposition date: 2024-07-25
Number of assemblies:  1
Assembly ID:  0  (author_and_software_defined_assembly)    
Structural data including_not_modeled
Oligomeric count 31
label_asym_ids of protein
31 chains (5 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z
label_asym_ids of heme HC IC OC RC TB UC VB ZB
label_asym_ids of the others
show AB (PGT), AC (CA), AD (3PE), BB (DU0), BC (3PE), BD (PC1), CB (3PE), CC (DU0), CD (PC1), DB (PC1), DC (FES), DD (3PE), EB (P5S), EC (DU0), ED (DU0), FA (PGT), FB (PGT), FC (3PH), FD (3PH), GA (DU0), GB (3PH), GC (CDL), GD (PC1), HA (PGT), HB (3PH), HD (PGT), IA (SF4), IB (3PH), JA (U10), JB (DU0), JC (U10), KA (CA), KB (PC1), KC (3PE), LA (PC1), LB (DU0), LC (U10), MA (FES), MB (PC1), MC (PC1), NA (SF4), NB (PGT), NC (CA), OA (FMN), OB (ZN), PA (FES), PB (PC1), PC (FES), QA (SF4), QB (PC1), QC (3PH), RA (SF4), RB (3PH), SA (DU0), SB (PC1), SC (CU), TA (3PE), TC (CA), UA (PC1), UB (U10), VA (SF4), VC (MN), WA (SF4), WB (U10), WC (CUA), XA (3PE), XB (PC1), XC (PC1), YA (T7X), YB (3PE), YC (ZN), ZA (DU0), ZC (PC1)
Each chain information

Showing all 31 chains (5 with heme). Show only chains with heme

Chain A  
auth_asym_id A
Residue indices (Uniprot) 1-121 (1-121)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A1B498 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.08 Å
Chain AA  
auth_asym_id i
Residue indices (Uniprot) 2-274 (1-274)
Uniprot ID A1BA37 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain B  
auth_asym_id B
Residue indices (Uniprot) 14-175 (1-175)
Uniprot ID A1B497 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BA  
auth_asym_id j
Residue indices (Uniprot) 8-50 (1-66)
Uniprot ID A1AZ52 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain C  
auth_asym_id C
Residue indices (Uniprot) 4-197 (1-208)
Uniprot ID A1B496 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain CA  
auth_asym_id o
Residue indices (Uniprot) 2-55 (1-176)
Missing residues 37SER-46HIS
Structural gaps Exists
Uniprot ID A1B311 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.15 Å
Chain D  
auth_asym_id D
Residue indices (Uniprot) 2-412 (1-412)
Missing residues 65ARG-65ARG
Nonstandard amino acids 2MR Structure of 2MR2MR
Uniprot ID A1B495 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain DA  
auth_asym_id p
Residue indices (Uniprot) 2-55 (1-176)
Missing residues 38GLY-46HIS
Structural gaps Exists
Uniprot ID A1B311 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.15 Å
Chain E  
auth_asym_id E
Residue indices (Uniprot) 1-237 (1-239)
Uniprot ID A1B494 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain EA  
auth_asym_id q
Residue indices (Uniprot) 1-123 (1-124)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A1B1H8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain F  
auth_asym_id F
Residue indices (Uniprot) 1-422 (1-431)
Uniprot ID A1B491 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id G
Residue indices (Uniprot) 2-666 (1-674)
Uniprot ID A1B489 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id H
Residue indices (Uniprot) 2-342 (1-345)
Uniprot ID A1B487 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id I
Residue indices (Uniprot) 2-163 (1-163)
Uniprot ID A1B486 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id J
Residue indices (Uniprot) 1-199 (1-199)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A1B483 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.08 Å
Chain K  
auth_asym_id K
Residue indices (Uniprot) 1-101 (1-101)
Uniprot ID A1B482 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id L
Residue indices (Uniprot) 1-703 (1-703)
Structural gaps Exists
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A1B481 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain M  
auth_asym_id M
Residue indices (Uniprot) 1-503 (1-513)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A1B480 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.08 Å
Chain N  
auth_asym_id N
Residue indices (Uniprot) 1-480 (1-499)
Uniprot ID A1B479 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain O  
auth_asym_id P
Residue indices (Uniprot) 3-330 (1-330)
Uniprot ID A1AZB0 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain P  
auth_asym_id Q
Residue indices (Uniprot) 1-103 (1-103)
Uniprot ID A1B1M0 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id R
Residue indices (Uniprot) 2-62 (1-62)
Uniprot ID A1B357 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain R  
auth_asym_id Z
Residue indices (Uniprot) 2-217 (1-217)
Uniprot ID A1B5L6 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain S heme  
auth_asym_id a
Residue indices (Uniprot) 2-434 (1-440)
Uniprot ID A1B4F3 ￫UniprotKB
label_asym_ids of heme TB ,  VB
Available structure PDB
Chain T heme  
auth_asym_id b
Residue indices (Uniprot) 212-450 (1-450)
Uniprot ID A1B4F4 ￫UniprotKB
label_asym_ids of heme ZB
Available structure PDB
Chain U  
auth_asym_id c
Residue indices (Uniprot) 16-195 (1-195)
Uniprot ID A1B4F2 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain V heme  
auth_asym_id d
Residue indices (Uniprot) 2-435 (1-440)
Uniprot ID A1B4F3 ￫UniprotKB
label_asym_ids of heme HC ,  IC
Available structure PDB
Chain W heme  
auth_asym_id e
Residue indices (Uniprot) 212-450 (1-450)
Uniprot ID A1B4F4 ￫UniprotKB
label_asym_ids of heme OC
Available structure PDB
Chain X  
auth_asym_id f
Residue indices (Uniprot) 15-195 (1-195)
Uniprot ID A1B4F2 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Y heme  
auth_asym_id g
Residue indices (Uniprot) 11-554 (1-558)
Uniprot ID A1B3D7 ￫UniprotKB
S-S bonds 66:80
label_asym_ids of heme RC ,  UC
Available structure PDB
Chain Z  
auth_asym_id h
Residue indices (Uniprot) 30-281 (1-298)
Uniprot ID A1BA41 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB