Danish
PDB ID:  pdb_00009gcx
  • Crystal structure of bovine Cytochrome bc1 in complex with inhibitor F8
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 3.522 Å
  • Deposition date: 2024-08-03
Number of assemblies:  1
Assembly ID:  1  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 22
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (SO4Structure of SO4SO4 ), AA-1 (SO4Structure of SO4SO4 ), BA (LOPStructure of LOPLOP ), BA-1 (LOPStructure of LOPLOP ), CA (SO4Structure of SO4SO4 ), CA-1 (SO4Structure of SO4SO4 ), DA (SO4Structure of SO4SO4 ), DA-1 (SO4Structure of SO4SO4 ), L (LOPStructure of LOPLOP ), L-1 (LOPStructure of LOPLOP ), M (CDLStructure of CDLCDL ), M-1 (CDLStructure of CDLCDL ), P (LOPStructure of LOPLOP ), P-1 (LOPStructure of LOPLOP ), Q (CDLStructure of CDLCDL ), Q-1 (CDLStructure of CDLCDL ), R (A1IStructure of A1IA1I ), R-1 (A1IStructure of A1IA1I ), S (LOPStructure of LOPLOP ), S-1 (LOPStructure of LOPLOP ), T (LOPStructure of LOPLOP ), T-1 (LOPStructure of LOPLOP ), U (LMTStructure of LMTLMT ), U-1 (LMTStructure of LMTLMT ), W (CDLStructure of CDLCDL ), W-1 (CDLStructure of CDLCDL ), X (FESStructure of FESFES ), X-1 (FESStructure of FESFES ), Y (LOPStructure of LOPLOP ), Y-1 (LOPStructure of LOPLOP ), Z (PSCStructure of PSCPSC ), Z-1 (PSCStructure of PSCPSC )
Each chain information

Showing all 22 chains (4 with heme). Show only chains with heme

Chain A  
auth_asym_id A
Residue indices (Uniprot) 2-446 (1-480)
Missing residues 223TYR-227ALA
Structural gaps Exists
Uniprot ID P31800 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain A-1  
auth_asym_id A
Residue indices (Uniprot) 2-446 (1-480)
Missing residues 223TYR-227ALA
Structural gaps Exists
Uniprot ID P31800 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain B  
auth_asym_id B
Residue indices (Uniprot) 22-439 (1-453)
Missing residues 231GLY-234GLY
Structural gaps Exists
Uniprot ID P23004 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain B-1  
auth_asym_id B
Residue indices (Uniprot) 22-439 (1-453)
Missing residues 231GLY-234GLY
Structural gaps Exists
Uniprot ID P23004 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 2-379 (1-379)
Uniprot ID P00157 ￫UniprotKB
label_asym_ids of heme O ,  N
Available structure PDB
Chain C-1 heme  
auth_asym_id C
Residue indices (Uniprot) 2-379 (1-379)
Uniprot ID P00157 ￫UniprotKB
label_asym_ids of heme O-1 ,  N-1
Available structure PDB
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 1-240 (1-325)
Uniprot ID P00125 ￫UniprotKB
label_asym_ids of heme V
Available structure PDB
Chain D-1 heme  
auth_asym_id D
Residue indices (Uniprot) 1-240 (1-325)
Uniprot ID P00125 ￫UniprotKB
label_asym_ids of heme V-1
Available structure PDB
Chain E  
auth_asym_id E
Residue indices (Uniprot) 1-196 (1-274)
Uniprot ID P13272 ￫UniprotKB
S-S bonds 144:160
label_asym_ids of heme None
Available structure PDB
Chain E-1  
auth_asym_id E
Residue indices (Uniprot) 1-196 (1-274)
Uniprot ID P13272 ￫UniprotKB
S-S bonds 144:160
label_asym_ids of heme None
Available structure PDB
Chain F  
auth_asym_id F
Residue indices (Uniprot) 12-109 (1-111)
Uniprot ID P00129 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain F-1  
auth_asym_id F
Residue indices (Uniprot) 12-109 (1-111)
Uniprot ID P00129 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id G
Residue indices (Uniprot) 2-75 (1-82)
Uniprot ID P13271 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G-1  
auth_asym_id G
Residue indices (Uniprot) 2-75 (1-82)
Uniprot ID P13271 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id H
Residue indices (Uniprot) 13-77 (11-91)
Mutations (UniProt numbering)
Uniprot ID P00126 ￫UniprotKB
S-S bonds 24:68,40:54
label_asym_ids of heme None
Available structure PDB
Chain H-1  
auth_asym_id H
Residue indices (Uniprot) 13-77 (11-91)
Mutations (UniProt numbering)
Uniprot ID P00126 ￫UniprotKB
S-S bonds 24:68,40:54
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id I
Residue indices (Uniprot) 49-75 (1-274)
Uniprot ID P13272 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain I-1  
auth_asym_id I
Residue indices (Uniprot) 49-75 (1-274)
Uniprot ID P13272 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id J
Residue indices (Uniprot) 4-59 (1-64)
Uniprot ID P00130 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain J-1  
auth_asym_id J
Residue indices (Uniprot) 4-59 (1-64)
Uniprot ID P00130 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id K
Residue indices (Uniprot) 9-52 (1-56)
Missing residues 38TRP-42LEU
Structural gaps Exists
Uniprot ID P07552 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.16 Å
Chain K-1  
auth_asym_id K
Residue indices (Uniprot) 9-52 (1-56)
Missing residues 38TRP-42LEU
Structural gaps Exists
Uniprot ID P07552 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.19 Å