Danish
PDB ID:  pdb_00009i4x
  • Toxoplasma gondii cytochrome bc1 complex from the respiratory supercomplex III2-IV inhibited by atovaquone and ELQ-300
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: unavailable
  • Deposition date: 2025-01-27
Number of assemblies:  1
Assembly ID:  0  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 24
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (A1IStructure of A1IA1I ), AB (FESStructure of FESFES ), BA (A1IStructure of A1IA1I ), BB (PC1Structure of PC1PC1 ), CB (CDLStructure of CDLCDL ), DB (ZNStructure of ZNZN ), EA (CDLStructure of CDLCDL ), EB (CDLStructure of CDLCDL ), FB (CDLStructure of CDLCDL ), GA (FESStructure of FESFES ), HA (PC1Structure of PC1PC1 ), IA (CDLStructure of CDLCDL ), JA (PC1Structure of PC1PC1 ), KA (CDLStructure of CDLCDL ), LA (ZNStructure of ZNZN ), MA (CDLStructure of CDLCDL ), NA (CDLStructure of CDLCDL ), OA (CDLStructure of CDLCDL ), PA (CDLStructure of CDLCDL ), QA (CDLStructure of CDLCDL ), RA (AOQStructure of AOQAOQ ), SA (A1IStructure of A1IA1I ), TA (A1IStructure of A1IA1I ), WA (CDLStructure of CDLCDL ), Y (CDLStructure of CDLCDL ), YA (CDLStructure of CDLCDL ), Z (AOQStructure of AOQAOQ ), ZA (PC1Structure of PC1PC1 )
Each chain information

Showing all 24 chains (4 with heme). Show only chains with heme

Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 9-368 (1-368)
Mutations (UniProt numbering)
Uniprot ID O20672 ￫UniprotKB
label_asym_ids of heme DA ,  CA
Available structure PDB
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 156-398 (1-398)
Uniprot ID S7W9J5 ￫UniprotKB
label_asym_ids of heme FA
Available structure PDB
Chain C  
auth_asym_id C
Residue indices (Uniprot) 160-487 (1-487)
Uniprot ID S7UK06 ￫UniprotKB
S-S bonds 436:451
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id D
Residue indices (Uniprot) 48-509 (1-509)
Missing residues 280ARG-285LEU
Structural gaps Exists
Uniprot ID S7W617 ￫UniprotKB
S-S bonds 389:397
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.09 Å
Chain E  
auth_asym_id E
Residue indices (Uniprot) 67-561 (1-563)
Missing residues 395GLY-404LYS
Structural gaps Exists
Uniprot ID A0A125YN38 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain F  
auth_asym_id F
Residue indices (Uniprot) 2-89 (1-89)
Uniprot ID S7VSS5 ￫UniprotKB
S-S bonds 37:79,41:75,51:65
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id G
Residue indices (Uniprot) 3-194 (1-234)
Uniprot ID A0A125YYJ3 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id H
Residue indices (Uniprot) 27-122 (1-122)
Uniprot ID A0A125YW19 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id I
Residue indices (Uniprot) -54-37 (1-128)
Uniprot ID S7UVH4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id J
Residue indices (Uniprot) 2-75 (1-80)
Uniprot ID S7UR33 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id K
Residue indices (Uniprot) 65-141 (1-141)
Uniprot ID A0A125YZN9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id L
Residue indices (Uniprot) 53-92 (1-109)
Uniprot ID S7UTB5 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain M heme  
auth_asym_id a
Residue indices (Uniprot) 9-368 (1-368)
Mutations (UniProt numbering)
Uniprot ID O20672 ￫UniprotKB
label_asym_ids of heme VA ,  UA
Available structure PDB
Chain N heme  
auth_asym_id b
Residue indices (Uniprot) 156-398 (1-398)
Uniprot ID S7W9J5 ￫UniprotKB
label_asym_ids of heme XA
Available structure PDB
Chain O  
auth_asym_id c
Residue indices (Uniprot) 160-487 (1-487)
Uniprot ID S7UK06 ￫UniprotKB
S-S bonds 436:451
label_asym_ids of heme None
Available structure PDB
Chain P  
auth_asym_id d
Residue indices (Uniprot) 48-509 (1-509)
Missing residues 280ARG-285LEU
Structural gaps Exists
Uniprot ID S7W617 ￫UniprotKB
S-S bonds 389:397
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain Q  
auth_asym_id e
Residue indices (Uniprot) 67-561 (1-563)
Missing residues 395GLY-404LYS
Structural gaps Exists
Uniprot ID A0A125YN38 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain R  
auth_asym_id f
Residue indices (Uniprot) 2-89 (1-89)
Uniprot ID S7VSS5 ￫UniprotKB
S-S bonds 37:79,41:75,51:65
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id g
Residue indices (Uniprot) 3-194 (1-234)
Uniprot ID A0A125YYJ3 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id h
Residue indices (Uniprot) 27-122 (1-122)
Uniprot ID A0A125YW19 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain U  
auth_asym_id i
Residue indices (Uniprot) -54-37 (1-128)
Uniprot ID S7UVH4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain V  
auth_asym_id j
Residue indices (Uniprot) 2-75 (1-80)
Uniprot ID S7UR33 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain W  
auth_asym_id k
Residue indices (Uniprot) 65-141 (1-141)
Uniprot ID A0A125YZN9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain X  
auth_asym_id l
Residue indices (Uniprot) 53-92 (1-109)
Uniprot ID S7UTB5 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB