Danish
PDB ID:  pdb_00009jpb
  • Cryo-EM structure of a tri-heme cytochrome-associated RC-LH1 complex from a marine photoheterotrophic bacterium, purified with EDTA-containing solutions
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: unavailable
  • Deposition date: 2024-09-25
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data PDB
Oligomeric count 39
label_asym_ids of protein
39 chains (1 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, KA, L, LA, M, MA, N, O, P, Q, R, S, T, U, V, W, X, Y, Z
label_asym_ids of heme FE GE HE
label_asym_ids of the others
show AB (MW9), AC (BCL), AD (SPN), AE (MW9), BB (SPN), BC (SPN), BD (MW9), BE (LMT), CB (BCL), CC (BCL), CD (BCL), CE (MW9), DB (SPN), DC (SPN), DD (SPN), DE (CDL), EB (BCL), EC (SPN), ED (BCL), EE (CDL), FB (SPN), FC (BCL), FD (MW9), GB (BCL), GC (MW9), GD (SPN), HB (SPN), HC (BCL), HD (BCL), IB (BCL), IC (BCL), ID (SPN), IE (LMT), JB (SPN), JC (SPN), JD (SPN), KB (SPN), KC (SPN), KD (BCL), LB (BCL), LC (MW9), LD (FE), MB (BCL), MC (BCL), MD (BCL), NA (BCL), NB (SPN), NC (SPN), ND (BPH), OA (BCL), OB (SPN), OC (BCL), OD (SPN), PA (SPN), PB (BCL), PC (SPN), PD (BCL), QA (BCL), QB (BCL), QC (MW9), QD (U10), RA (SPN), RB (SPN), RC (MW9), RD (MW9), SA (SPN), SB (BCL), SC (BCL), SD (MW9), TA (SPN), TB (SPN), TC (SPN), TD (BCL), UA (BCL), UB (BCL), UC (BCL), UD (BPH), VA (SPN), VB (SPN), VC (SPN), VD (U10), WA (BCL), WB (BCL), WC (LMT), WD (BCL), XA (BCL), XB (SPN), XC (BCL), XD (LMT), YA (BCL), YB (BCL), YC (BCL), YD (LMT), ZA (SPN), ZB (SPN), ZC (SPN), ZD (MW9)
Each chain information

Showing all 39 chains (1 with heme). Show only chains with heme

Chain A  
auth_asym_id P
Residue indices (Uniprot) 1-51 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain AA  
auth_asym_id F
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain B  
auth_asym_id O
Residue indices (Uniprot) 8-59 (1-239)
Uniprot ID A8LIU2 ￫UniprotKB
S-S bonds 10:59
label_asym_ids of heme None
Available structure PDB
Chain BA  
auth_asym_id e
Residue indices (Uniprot) 6-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain C  
auth_asym_id V
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain CA  
auth_asym_id E
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id v
Residue indices (Uniprot) 10-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain DA  
auth_asym_id d
Residue indices (Uniprot) 6-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain E  
auth_asym_id S
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain EA  
auth_asym_id D
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain F  
auth_asym_id t
Residue indices (Uniprot) 7-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain FA  
auth_asym_id b
Residue indices (Uniprot) 6-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id T
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain GA  
auth_asym_id B
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id s
Residue indices (Uniprot) 6-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain HA  
auth_asym_id a
Residue indices (Uniprot) 6-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id Q
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain IA  
auth_asym_id A
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id r
Residue indices (Uniprot) 7-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain JA  
auth_asym_id M
Residue indices (Uniprot) 2-326 (1-330)
Uniprot ID A8LQ17 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id R
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain KA  
auth_asym_id L
Residue indices (Uniprot) 2-275 (1-279)
Mutations (UniProt numbering) G278D, L279C
Uniprot ID A8LQ16 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id q
Residue indices (Uniprot) 6-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain LA  
auth_asym_id H
Residue indices (Uniprot) 1-256 (1-256)
Uniprot ID A8LQ33 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain M  
auth_asym_id p
Residue indices (Uniprot) 6-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain MA heme  
auth_asym_id C
Residue indices (Uniprot) 9-360 (1-360)
Uniprot ID A8LQ18 ￫UniprotKB
label_asym_ids of heme FE ,  GE ,  HE
Available structure PDB
Chain N  
auth_asym_id 2
Residue indices (Uniprot) 6-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain O  
auth_asym_id 1
Residue indices (Uniprot) 2-51 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain P  
auth_asym_id n
Residue indices (Uniprot) 6-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id N
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain R  
auth_asym_id k
Residue indices (Uniprot) 7-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id K
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id j
Residue indices (Uniprot) 7-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain U  
auth_asym_id J
Residue indices (Uniprot) 2-51 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain V  
auth_asym_id i
Residue indices (Uniprot) 7-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain W  
auth_asym_id I
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain X  
auth_asym_id g
Residue indices (Uniprot) 6-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Y  
auth_asym_id G
Residue indices (Uniprot) 2-52 (1-53)
Uniprot ID A8LQ15 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Z  
auth_asym_id f
Residue indices (Uniprot) 6-49 (1-49)
Uniprot ID A8LQ14 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB