Danish
PDB ID:  pdb_00009m8m
  • Structure of photosynthetic LH1-RC complex the Halophilic Nonsulfur Purple Bacterium, Rhodothalassium salexigens
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: 2.3 Å
  • Deposition date: 2025-03-12
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data including_not_modeled
Oligomeric count 36
label_asym_ids of protein
36 chains (1 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z
label_asym_ids of heme KA LA MA NA
label_asym_ids of the others
show AB (U10), AC (U10), AD (LMT), AE (LMT), AF (CRT), BB (BCL), BC (CRT), BD (BCL), BE (BCL), BF (BCL), CB (BCL), CC (BCL), CD (CRT), CE (U10), CF (PGV), DB (FE), DC (PGV), DD (BCL), DE (PGV), EB (BCL), EC (LMT), ED (PGV), EE (CRT), FB (BPH), FC (BCL), FD (BCL), FE (BCL), GB (A1L), GC (LMT), GD (CRT), GE (PGV), HB (CRT), HC (CRT), HD (BCL), HE (BCL), IB (PGV), IC (BCL), ID (PGV), IE (CRT), JB (PGV), JC (PGV), JD (LMT), JE (BCL), KB (PGV), KC (BCL), KD (U10), KE (PGV), LB (LMT), LC (CRT), LD (BCL), LE (LMT), MB (PGV), MC (BCL), MD (CRT), ME (LMT), NB (PGV), NC (PGV), ND (BCL), NE (LMT), OA (Z41), OB (LMT), OC (LMT), OD (PGV), OE (BCL), PA (PLM), PB (PGV), PC (BCL), PD (LMT), PE (CRT), QA (MG), QB (PGV), QC (PGV), QD (BCL), QE (BCL), RA (MG), RB (PGV), RC (LMT), RD (BCL), RE (U10), SA (CA), SB (BCL), SC (CRT), SD (PGV), SE (BCL), TA (BCL), TB (CRT), TC (BCL), TD (LMT), TE (LMT), UA (BPH), UB (BCL), UC (PGV), UD (CRT), UE (PGV), VA (U10), VB (PGV), VC (BCL), VD (BCL), VE (CRT), WA (LMT), WB (LMT), WC (LMT), WD (U10), WE (BCL), XA (PGV), XB (PGV), XC (CRT), XD (CRT), XE (PGV), YA (PGV), YB (BCL), YC (BCL), YD (BCL), YE (BCL), ZA (U10), ZB (LMT), ZC (PGV), ZD (LMT), ZE (LMT)
Each chain information

Showing all 36 chains (1 with heme). Show only chains with heme

Chain A heme  
auth_asym_id C
Residue indices (Uniprot) 25-368 (1-385)
Uniprot ID A0A4R2PKR2 ￫UniprotKB
S-S bonds 173:340
label_asym_ids of heme NA ,  MA ,  LA ,  KA
Available structure PDB
Chain AA  
auth_asym_id 1
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain B  
auth_asym_id L
Residue indices (Uniprot) 1-274 (1-275)
Uniprot ID A0A2L1K3Q4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BA  
auth_asym_id 2
Residue indices (Uniprot) 8-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain C  
auth_asym_id M
Residue indices (Uniprot) 2-319 (1-323)
Uniprot ID A0A2L1K3U8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain CA  
auth_asym_id 3
Residue indices (Uniprot) 1-46 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain D  
auth_asym_id H
Residue indices (Uniprot) 1-324 (1-324)
Structural gaps Exists
Uniprot ID A0A4R2PIK4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain DA  
auth_asym_id 4
Residue indices (Uniprot) 9-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain E  
auth_asym_id A
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain EA  
auth_asym_id 5
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain F  
auth_asym_id B
Residue indices (Uniprot) 8-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain FA  
auth_asym_id 6
Residue indices (Uniprot) 10-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id D
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain GA  
auth_asym_id 7
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain H  
auth_asym_id E
Residue indices (Uniprot) 7-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain HA  
auth_asym_id 8
Residue indices (Uniprot) 10-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id F
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain IA  
auth_asym_id 9
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain J  
auth_asym_id G
Residue indices (Uniprot) 8-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain JA  
auth_asym_id 0
Residue indices (Uniprot) 6-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id I
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain L  
auth_asym_id J
Residue indices (Uniprot) 9-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain M  
auth_asym_id K
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain N  
auth_asym_id N
Residue indices (Uniprot) 10-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain O  
auth_asym_id O
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain P  
auth_asym_id P
Residue indices (Uniprot) 10-54 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id Q
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain R  
auth_asym_id R
Residue indices (Uniprot) 9-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id S
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain T  
auth_asym_id T
Residue indices (Uniprot) 9-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain U  
auth_asym_id U
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain V  
auth_asym_id V
Residue indices (Uniprot) 10-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain W  
auth_asym_id W
Residue indices (Uniprot) 1-47 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain X  
auth_asym_id X
Residue indices (Uniprot) 8-53 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Y  
auth_asym_id Y
Residue indices (Uniprot) 1-46 (1-59)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID A0A4R2PMJ4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain Z  
auth_asym_id Z
Residue indices (Uniprot) 10-54 (1-67)
Uniprot ID A0A4R2PKF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB