Danish
PDB ID:  pdb_00009qlk
  • Structure of piperazate synthase from Streptomyces sp.
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2.14 Å
  • Deposition date: 2025-03-21
Number of assemblies:  3
Assembly ID:  1  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 2
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others H (GOLStructure of GOLGOL ), J (CAStructure of CACA )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 0-227 (-)
Missing residues 211ALA-226HIS
Structural gaps Exists
Uniprot ID Unavailable
label_asym_ids of heme G ,  I
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 0-227 (-)
Missing residues 212THR-226HIS
Structural gaps Exists
Uniprot ID Unavailable
label_asym_ids of heme G ,  I
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.14 Å
Assembly ID:  2  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 2
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others L (GOLStructure of GOLGOL ), M (GOLStructure of GOLGOL ), N (CAStructure of CACA ), O (GOLStructure of GOLGOL ), Q (GOLStructure of GOLGOL ), R (CAStructure of CACA )
Each chain information
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 0-227 (-)
Missing residues 210GLU-226HIS
Structural gaps Exists
Uniprot ID Unavailable
label_asym_ids of heme K ,  P
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 0-227 (-)
Missing residues 214ARG-226HIS
Structural gaps Exists
Uniprot ID Unavailable
label_asym_ids of heme K ,  P
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Assembly ID:  3  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 2
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others T (PEGStructure of PEGPEG )
Each chain information
Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 0-209 (-)
Uniprot ID Unavailable
label_asym_ids of heme S
Available structure PDB
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 0-227 (-)
Missing residues 212THR-226HIS
Structural gaps Exists
Uniprot ID Unavailable
label_asym_ids of heme S ,  U
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å