Danish

PDB ID: pdb_00009wfz

Cryo-EM structure of PSII PsbA3-S264V from Thermosynechococcus vestitus BP-1 (local refinement)
Experimental method: ELECTRON MICROSCOPY
Resolution: unavailable
Deposition date: 2025-08-22

Number of assemblies: 1

Assembly ID: 0 (author_defined_assembly)
Structural data	including_not_modeled
Oligomeric count	19
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others	AA (BCR ), AB (CLA ), AC (SQD ), BA (LMT ), BB (CLA ), BC (LMT ), CB (CLA ), CC (LHG ), DA (OEX ), DB (CLA ), DC (LMT ), EA (FE2 ), EB (CLA ), EC (UNL ), FA (CL ), FB (CLA ), GA (CL ), GB (CLA ), HA (CLA ), HB (CLA ), IA (CLA ), IB (DGD ), JA (PHO ), JB (DGD ), KA (CLA ), KB (DGD ), LA (BCR ), LB (CLA ), MA (PL9 ), MB (PHO ), NA (UNL ), NB (CLA ), OA (CLA ), OB (CLA ), PA (BCT ), PB (CLA ), QA (LHG ), QB (CLA ), RA (LHG ), RB (CLA ), SA (BCR ), SB (BCR ), T (UNL ), TA (CLA ), TB (PL9 ), U (BCR ), UA (CLA ), UB (LHG ), V (BCR ), VA (LMG ), VB (LMG ), W (BCR ), WA (SQD ), WB (UNL ), X (UNL ), XA (LMG ), XB (LHG ), Y (BCR ), YA (CLA ), YB (DGD ), Z (UNL ), ZA (CLA )

Each chain information

Showing all 19 chains (3 with heme). Show only chains with heme

Chain A
auth_asym_id	I
Residue indices (Uniprot)	1-36 (1-38)
Uniprot ID	Q8DJZ6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain B
auth_asym_id	K
Residue indices (Uniprot)	10-46 (1-46)
Uniprot ID	Q9F1K9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain C
auth_asym_id	T
Residue indices (Uniprot)	1-29 (1-32)
Uniprot ID	Q8DIQ0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain D heme
auth_asym_id	V
Residue indices (Uniprot)	8-137 (1-163)
Uniprot ID	P0A386 ￫UniprotKB
label_asym_ids of heme	CA
Available structure	PDB

Chain E
auth_asym_id	Y
Residue indices (Uniprot)	18-46 (1-46)
Uniprot ID	Q8DJI1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain F
auth_asym_id	A
Residue indices (Uniprot)	14-344 (1-360)
Mutations (UniProt numbering)
Missing residues	228THR-231GLU:308ASP-310GLN
Structural gaps	Exists
Uniprot ID	Q8DIV4 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.11 Å

Chain G
auth_asym_id	B
Residue indices (Uniprot)	271-505 (1-510)
Structural gaps	Exists
Uniprot ID	Q8DIQ1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain H
auth_asym_id	C
Residue indices (Uniprot)	24-473 (1-461)
Structural gaps	Exists
Uniprot ID	Q8DIF8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain I
auth_asym_id	D
Residue indices (Uniprot)	21-352 (1-352)
Missing residues	325ILE-325ILE
Structural gaps	Exists
Uniprot ID	Q8CM25 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.11 Å

Chain J heme
auth_asym_id	E
Residue indices (Uniprot)	4-82 (1-84)
Missing residues	16SER-17VAL:21VAL-21VAL:39SER-42LEU:51ARG-60GLN:62SER-62SER
Structural gaps	Exists
Uniprot ID	Q8DIP0 ￫UniprotKB
label_asym_ids of heme	ZB
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.18 Å

Chain K heme
auth_asym_id	F
Residue indices (Uniprot)	13-45 (1-45)
Missing residues	44GLN-44GLN
Structural gaps	Exists
Uniprot ID	Q8DIN9 ￫UniprotKB
label_asym_ids of heme	ZB
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.15 Å

Chain L
auth_asym_id	J
Residue indices (Uniprot)	9-40 (1-40)
Missing residues	35GLY-35GLY
Structural gaps	Exists
Uniprot ID	P59087 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.16 Å

Chain M
auth_asym_id	L
Residue indices (Uniprot)	13-37 (1-37)
Uniprot ID	Q8DIN8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain N
auth_asym_id	M
Residue indices (Uniprot)	1-15 (1-36)
Missing residues	13LEU-13LEU
Structural gaps	Exists
Uniprot ID	Q8DHA7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.22 Å

Chain O
auth_asym_id	O
Residue indices (Uniprot)	11-239 (1-272)
Structural gaps	Exists
Uniprot ID	P0A431 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain P
auth_asym_id	U
Residue indices (Uniprot)	9-104 (1-134)
Missing residues	10VAL-10VAL:89THR-89THR
Structural gaps	Exists
Uniprot ID	Q9F1L5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.12 Å

Chain Q
auth_asym_id	X
Residue indices (Uniprot)	20-38 (1-41)
Missing residues	21LEU-22GLY:25PHE-26ALA:29ILE-29ILE
Structural gaps	Exists
Uniprot ID	Q9F1R6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.50 Å

Chain R
auth_asym_id	Z
Residue indices (Uniprot)	1-43 (1-62)
Missing residues	38GLN-38GLN:41PHE-42LEU
Structural gaps	Exists
Uniprot ID	Q8DHJ2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.25 Å

Chain S
auth_asym_id	b
Residue indices (Uniprot)	39-98 (1-510)
Structural gaps	Exists
Uniprot ID	Q8DIQ1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB