Danish

PDB ID: pdb_00009z34

RT XFEL structure of one-flash state of Photosystem II (1F, S2 rich) at 1.98 Angstrom obtained from anomalous data at 9.5 keV
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposition date: 2025-11-05

Number of assemblies: 1

Assembly ID: 0 (author_defined_assembly)
Structural data	modeled
Oligomeric count	40
label_asym_ids of protein	40 chains (6 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, P, Q, R, S, T, U, V, W, X, Y, Z
label_asym_ids of heme	PE PI VH YD
label_asym_ids of the others	show AB (STE), AC (BCR), AD (STE), AE (DGD), AF (CLA), AG (BCR), AH (DGD), AI (STE), BB (CLA), BC (BCR), BD (STE), BE (STE), BF (BCR), BG (BCR), BH (DGD), BI (STE), CB (LMG), CC (BCR), CD (STE), CE (STE), CF (PL9), CG (SQD), CH (DGD), CI (STE), DB (SQD), DC (LMG), DD (DGD), DE (STE), DF (CLA), DG (STE), DH (LMG), DI (STE), EB (LHG), EC (STE), ED (DGD), EE (BCR), EF (LHG), EG (LMG), EH (LMG), EI (STE), FB (SQD), FC (SQD), FD (DGD), FE (STE), FF (SQD), FG (STE), FH (LMG), FI (BCR), GB (DGD), GC (STE), GD (LMG), GE (BCR), GF (SQD), GG (STE), GH (PHO), GI (BCR), HB (STE), HC (STE), HD (STE), HE (STE), HF (LMG), HG (STE), HH (CLA), HI (STE), IB (STE), IC (STE), ID (STE), IE (LHG), IF (STE), IG (CLA), IH (CLA), II (LHG), JB (STE), JC (CLA), JD (STE), JE (LMG), JF (CLA), JG (CLA), JH (BCR), JI (LMG), KB (CLA), KC (CLA), KD (CLA), KE (STE), KF (CLA), KG (CLA), KH (PL9), KI (STE), LB (CLA), LC (CLA), LD (CLA), LE (STE), LF (CLA), LG (CLA), LH (STE), LI (STE), MB (CLA), MC (CLA), MD (BCR), ME (STE), MF (CLA), MG (CLA), MH (LHG), MI (BCR), NB (CLA), NC (CLA), ND (PL9), NE (BCR), NF (CLA), NG (CLA), NH (LHG), NI (STE), OA (OEX), OB (CLA), OC (CLA), OD (LMG), OE (STE), OF (CLA), OG (CLA), OH (STE), OI (STE), PA (FE2), PB (CLA), PC (CLA), PD (LMG), PF (CLA), PG (CLA), PH (LMG), QA (CL), QB (CLA), QC (CLA), QD (SQD), QE (STE), QF (CLA), QG (CLA), QH (STE), QI (STE), RA (CL), RB (CLA), RC (CLA), RD (LHG), RE (STE), RF (CLA), RG (CLA), RH (STE), SA (BCT), SB (CLA), SC (CLA), SD (LHG), SE (OEX), SF (CLA), SG (CLA), SH (LHG), TA (CLA), TB (CLA), TC (CLA), TD (LHG), TE (FE2), TF (CLA), TG (CLA), TH (STE), UA (CLA), UB (CLA), UC (CLA), UD (STE), UE (CL), UF (CLA), UG (CLA), UH (STE), VA (PHO), VB (CLA), VC (CLA), VD (STE), VE (CL), VF (CLA), VG (BCR), WA (PHO), WB (CLA), WC (BCR), WD (STE), WE (BCT), WF (CLA), WG (BCR), WH (SQD), XA (CLA), XB (CLA), XC (BCR), XD (STE), XE (CLA), XF (CLA), XG (STE), XH (STE), YA (BCR), YB (CLA), YC (STE), YE (CLA), YF (CLA), YG (STE), YH (BCR), ZA (PL9), ZB (CLA), ZC (LMG), ZD (BCR), ZE (PHO), ZF (BCR), ZG (LMG), ZH (DGD)

Each chain information

Showing 6 chains with heme of 40. Show all chains

Chain E heme
auth_asym_id	E
Residue indices (Uniprot)	3-84 (1-84)
Uniprot ID	Q8DIP0 ￫UniprotKB
label_asym_ids of heme	YD
Available structure	PDB

Chain F heme
auth_asym_id	F
Residue indices (Uniprot)	12-45 (1-45)
Uniprot ID	Q8DIN9 ￫UniprotKB
label_asym_ids of heme	YD
Available structure	PDB

Chain JA heme
auth_asym_id	v
Residue indices (Uniprot)	1-137 (1-163)
Uniprot ID	P0A386 ￫UniprotKB
label_asym_ids of heme	PI
Available structure	PDB

Chain P heme
auth_asym_id	V
Residue indices (Uniprot)	1-137 (1-163)
Uniprot ID	P0A386 ￫UniprotKB
label_asym_ids of heme	PE
Available structure	PDB

Chain Y heme
auth_asym_id	e
Residue indices (Uniprot)	3-84 (1-84)
Uniprot ID	Q8DIP0 ￫UniprotKB
label_asym_ids of heme	VH
Available structure	PDB

Chain Z heme
auth_asym_id	f
Residue indices (Uniprot)	12-45 (1-45)
Uniprot ID	Q8DIN9 ￫UniprotKB
label_asym_ids of heme	VH
Available structure	PDB