Danish
PDB ID:  pdb_00001yhu
  • Crystal structure of Riftia pachyptila C1 hemoglobin reveals novel assembly of 24 subunits.
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 3.15 Å
  • Deposition date: 2005-01-10
Number of assemblies:  1
Assembly ID:  0  (author_and_software_defined_assembly)    
Structural data PDB
Oligomeric count 24
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (ZNStructure of ZNZN ), BA (ZNStructure of ZNZN ), BB (OXYStructure of OXYOXY ), BC (OXYStructure of OXYOXY ), DA (OXYStructure of OXYOXY ), DB (OXYStructure of OXYOXY ), DC (OXYStructure of OXYOXY ), EB (ZNStructure of ZNZN ), FA (OXYStructure of OXYOXY ), FB (ZNStructure of ZNZN ), FC (OXYStructure of OXYOXY ), HA (OXYStructure of OXYOXY ), HB (OXYStructure of OXYOXY ), JA (OXYStructure of OXYOXY ), JB (OXYStructure of OXYOXY ), KA (ZNStructure of ZNZN ), LA (ZNStructure of ZNZN ), LB (OXYStructure of OXYOXY ), NA (OXYStructure of OXYOXY ), NB (OXYStructure of OXYOXY ), OB (ZNStructure of ZNZN ), PA (OXYStructure of OXYOXY ), PB (ZNStructure of ZNZN ), RA (OXYStructure of OXYOXY ), RB (OXYStructure of OXYOXY ), TA (OXYStructure of OXYOXY ), TB (OXYStructure of OXYOXY ), UA (ZNStructure of ZNZN ), VA (ZNStructure of ZNZN ), VB (OXYStructure of OXYOXY ), XA (OXYStructure of OXYOXY ), XB (OXYStructure of OXYOXY ), YB (ZNStructure of ZNZN ), Z (OXYStructure of OXYOXY ), ZA (OXYStructure of OXYOXY ), ZB (ZNStructure of ZNZN )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 3-147 (1-115)
Uniprot ID Q8IFK4 ￫UniprotKB
S-S bonds 4:133
label_asym_ids of heme Y
Available structure PDB
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 1-144 (1-144)
Uniprot ID P80592 ￫UniprotKB
S-S bonds 4:134
label_asym_ids of heme CA
Available structure PDB
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 1-148 (1-118)
Mutations (UniProt numbering)
Uniprot ID Q8IFK2 ￫UniprotKB
S-S bonds 4:136
label_asym_ids of heme EA
Available structure PDB
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 1-149 (1-117)
Uniprot ID Q8IFJ9 ￫UniprotKB
S-S bonds 4:135
label_asym_ids of heme GA
Available structure PDB
Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 3-147 (1-115)
Uniprot ID Q8IFK4 ￫UniprotKB
S-S bonds 4:133
label_asym_ids of heme IA
Available structure PDB
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 1-144 (1-144)
Uniprot ID P80592 ￫UniprotKB
S-S bonds 4:134
label_asym_ids of heme MA
Available structure PDB
Chain G heme  
auth_asym_id G
Residue indices (Uniprot) 1-148 (1-118)
Mutations (UniProt numbering)
Uniprot ID Q8IFK2 ￫UniprotKB
S-S bonds 4:136
label_asym_ids of heme OA
Available structure PDB
Chain H heme  
auth_asym_id H
Residue indices (Uniprot) 1-149 (1-117)
Uniprot ID Q8IFJ9 ￫UniprotKB
S-S bonds 4:135
label_asym_ids of heme QA
Available structure PDB
Chain I heme  
auth_asym_id I
Residue indices (Uniprot) 3-147 (1-115)
Uniprot ID Q8IFK4 ￫UniprotKB
S-S bonds 4:133
label_asym_ids of heme SA
Available structure PDB
Chain J heme  
auth_asym_id J
Residue indices (Uniprot) 1-144 (1-144)
Uniprot ID P80592 ￫UniprotKB
S-S bonds 4:134
label_asym_ids of heme WA
Available structure PDB
Chain K heme  
auth_asym_id K
Residue indices (Uniprot) 1-148 (1-118)
Mutations (UniProt numbering)
Uniprot ID Q8IFK2 ￫UniprotKB
S-S bonds 4:136
label_asym_ids of heme YA
Available structure PDB
Chain L heme  
auth_asym_id L
Residue indices (Uniprot) 1-149 (1-117)
Uniprot ID Q8IFJ9 ￫UniprotKB
S-S bonds 4:135
label_asym_ids of heme AB
Available structure PDB
Chain M heme  
auth_asym_id M
Residue indices (Uniprot) 3-147 (1-115)
Uniprot ID Q8IFK4 ￫UniprotKB
S-S bonds 4:133
label_asym_ids of heme CB
Available structure PDB
Chain N heme  
auth_asym_id N
Residue indices (Uniprot) 1-144 (1-144)
Uniprot ID P80592 ￫UniprotKB
S-S bonds 4:134
label_asym_ids of heme GB
Available structure PDB
Chain O heme  
auth_asym_id O
Residue indices (Uniprot) 1-148 (1-118)
Mutations (UniProt numbering)
Uniprot ID Q8IFK2 ￫UniprotKB
S-S bonds 4:136
label_asym_ids of heme IB
Available structure PDB
Chain P heme  
auth_asym_id P
Residue indices (Uniprot) 1-149 (1-117)
Uniprot ID Q8IFJ9 ￫UniprotKB
S-S bonds 4:135
label_asym_ids of heme KB
Available structure PDB
Chain Q heme  
auth_asym_id Q
Residue indices (Uniprot) 3-147 (1-115)
Uniprot ID Q8IFK4 ￫UniprotKB
S-S bonds 4:133
label_asym_ids of heme MB
Available structure PDB
Chain R heme  
auth_asym_id R
Residue indices (Uniprot) 1-144 (1-144)
Uniprot ID P80592 ￫UniprotKB
S-S bonds 4:134
label_asym_ids of heme QB
Available structure PDB
Chain S heme  
auth_asym_id S
Residue indices (Uniprot) 1-148 (1-118)
Mutations (UniProt numbering)
Uniprot ID Q8IFK2 ￫UniprotKB
S-S bonds 4:136
label_asym_ids of heme SB
Available structure PDB
Chain T heme  
auth_asym_id T
Residue indices (Uniprot) 1-149 (1-117)
Uniprot ID Q8IFJ9 ￫UniprotKB
S-S bonds 4:135
label_asym_ids of heme UB
Available structure PDB
Chain U heme  
auth_asym_id U
Residue indices (Uniprot) 3-147 (1-115)
Uniprot ID Q8IFK4 ￫UniprotKB
S-S bonds 4:133
label_asym_ids of heme WB
Available structure PDB
Chain V heme  
auth_asym_id V
Residue indices (Uniprot) 1-144 (1-144)
Uniprot ID P80592 ￫UniprotKB
S-S bonds 4:134
label_asym_ids of heme AC
Available structure PDB
Chain W heme  
auth_asym_id W
Residue indices (Uniprot) 1-148 (1-118)
Mutations (UniProt numbering)
Uniprot ID Q8IFK2 ￫UniprotKB
S-S bonds 4:136
label_asym_ids of heme CC
Available structure PDB
Chain X heme  
auth_asym_id X
Residue indices (Uniprot) 1-149 (1-117)
Uniprot ID Q8IFJ9 ￫UniprotKB
S-S bonds 4:135
label_asym_ids of heme EC
Available structure PDB