Danish
PDB ID:  pdb_00002ybb
  • Fitted model for bovine mitochondrial supercomplex I1III2IV1 by single particle cryo-EM (EMD-1876)
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: 19 Å
  • Deposition date: 2011-03-02
Number of assemblies:  1
Assembly ID:  0  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 48
label_asym_ids of protein
48 chains (6 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, OA, P, PA, Q, QA, R, RA, S, SA, T, TA, U, UA, V, VA, W, X, Y, Z
label_asym_ids of heme DC EC FC IC OB PB SB WB XB
label_asym_ids of the others
show AB (FES), AC (CU), BB (MG), BC (CU), CB (SF4), CC (ZN), DB (SF4), EB (SF4), FB (FES), GB (MG), GC (SMA), HB (MG), HC (UQ1), IB (MG), JB (MG), JC (CDL), KB (SF4), KC (FES), LB (CA), LC (CDL), MB (SF4), NB (SF4), QB (SMA), RB (UQ1), TB (FES), UB (CDL), VB (CDL), WA (SF4), XA (FMN), YA (NAI), YB (CU), ZA (MG), ZB (MG)
Each chain information

Showing 6 chains with heme of 48. Show all chains

Chain GA heme  
auth_asym_id Y
Residue indices (Uniprot) 1-104 (2-105)
Uniprot ID P62894 ￫UniprotKB
label_asym_ids of heme DC
Available structure PDB
Chain JA heme  
auth_asym_id c
Residue indices (Uniprot) 10-379 (1-379)
Missing residues 15ASN-15ASN
Structural gaps Exists
Uniprot ID P00157 ￫UniprotKB
label_asym_ids of heme FC ,  EC
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.09 Å
Chain K heme  
auth_asym_id C
Residue indices (Uniprot) 15-379 (1-379)
Uniprot ID P00157 ￫UniprotKB
label_asym_ids of heme PB ,  OB
Available structure PDB
Chain KA heme  
auth_asym_id d
Residue indices (Uniprot) 1-241 (85-325)
Uniprot ID P00125 ￫UniprotKB
label_asym_ids of heme IC
Available structure PDB
Chain L heme  
auth_asym_id D
Residue indices (Uniprot) 1-241 (85-325)
Uniprot ID P00125 ￫UniprotKB
label_asym_ids of heme SB
Available structure PDB
Chain T heme  
auth_asym_id L
Residue indices (Uniprot) 1-514 (1-514)
Uniprot ID P00396 ￫UniprotKB
label_asym_ids of heme XB ,  WB
Available structure PDB