PDB ID:  pdb_00004ogq
  • Internal Lipid Architecture of the Hetero-Oligomeric Cytochrome b6f Complex
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2.501 Å
  • Deposition date: 2014-01-16
Number of assemblies:  1
Assembly ID:  1  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 16
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (UMQStructure of UMQUMQ ), AA-1 (UMQStructure of UMQUMQ ), BA (MYSStructure of MYSMYS ), BA-1 (MYSStructure of MYSMYS ), CA (7PHStructure of 7PH7PH ), CA-1 (7PHStructure of 7PH7PH ), DA (SQDStructure of SQDSQD ), DA-1 (SQDStructure of SQDSQD ), EA (FESStructure of FESFES ), EA-1 (FESStructure of FESFES ), FA (2WDStructure of 2WD2WD ), FA-1 (2WDStructure of 2WD2WD ), GA (3WMStructure of 3WM3WM ), GA-1 (3WMStructure of 3WM3WM ), HA (2WAStructure of 2WA2WA ), HA-1 (2WAStructure of 2WA2WA ), IA (OCTStructure of OCTOCT ), IA-1 (OCTStructure of OCTOCT ), JA (1O2Structure of 1O21O2 ), JA-1 (1O2Structure of 1O21O2 ), KA (7PHStructure of 7PH7PH ), KA-1 (7PHStructure of 7PH7PH ), L (UMQStructure of UMQUMQ ), L-1 (UMQStructure of UMQUMQ ), LA (UMQStructure of UMQUMQ ), LA-1 (UMQStructure of UMQUMQ ), M (7PHStructure of 7PH7PH ), M-1 (7PHStructure of 7PH7PH ), MA (BCRStructure of BCRBCR ), MA-1 (BCRStructure of BCRBCR ), N (8K6Structure of 8K68K6 ), N-1 (8K6Structure of 8K68K6 ), O (8K6Structure of 8K68K6 ), O-1 (8K6Structure of 8K68K6 ), P (8K6Structure of 8K68K6 ), P-1 (8K6Structure of 8K68K6 ), Q (2WMStructure of 2WM2WM ), Q-1 (2WMStructure of 2WM2WM ), R (UMQStructure of UMQUMQ ), R-1 (UMQStructure of UMQUMQ ), S (8K6Structure of 8K68K6 ), S-1 (8K6Structure of 8K68K6 ), T (UMQStructure of UMQUMQ ), T-1 (UMQStructure of UMQUMQ ), U (CLAStructure of CLACLA ), U-1 (CLAStructure of CLACLA ), V (OPCStructure of OPCOPC ), V-1 (OPCStructure of OPCOPC ), W (7PHStructure of 7PH7PH ), W-1 (7PHStructure of 7PH7PH ), Y (CDStructure of CDCD ), Y-1 (CDStructure of CDCD ), Z (7PHStructure of 7PH7PH ), Z-1 (7PHStructure of 7PH7PH )
Each chain information

Showing all 16 chains (4 with heme). Show only chains with heme

Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 2-215 (1-215)
Uniprot ID P0A384 →UniprotKB
label_asym_ids of heme J ,  I
Available structure PDB
Chain A-1 heme  
auth_asym_id A
Residue indices (Uniprot) 2-215 (1-215)
Uniprot ID P0A384 →UniprotKB
label_asym_ids of heme J-1 ,  I-1
Available structure PDB
Chain B  
auth_asym_id B
Residue indices (Uniprot) 2-160 (1-160)
Uniprot ID Q93SX1 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain B-1  
auth_asym_id B
Residue indices (Uniprot) 2-160 (1-160)
Uniprot ID Q93SX1 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 1-289 (1-333)
Missing residues 200LYS-207VAL
Structural gaps Exists
Uniprot ID Q93SW9 →UniprotKB
label_asym_ids of heme X
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain C-1 heme  
auth_asym_id C
Residue indices (Uniprot) 1-289 (1-333)
Missing residues 200LYS-207VAL
Structural gaps Exists
Uniprot ID Q93SW9 →UniprotKB
label_asym_ids of heme X-1
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain D  
auth_asym_id D
Residue indices (Uniprot) 9-179 (1-179)
Missing residues 93VAL-97GLU
Structural gaps Exists
Uniprot ID Q93SX0 →UniprotKB
S-S bonds 113:128
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.16 Å
Chain D-1  
auth_asym_id D
Residue indices (Uniprot) 9-179 (1-179)
Missing residues 93VAL-97GLU
Structural gaps Exists
Uniprot ID Q93SX0 →UniprotKB
S-S bonds 113:128
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.17 Å
Chain E  
auth_asym_id E
Residue indices (Uniprot) 1-31 (1-31)
Uniprot ID Q8YVQ2 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain E-1  
auth_asym_id E
Residue indices (Uniprot) 1-31 (1-31)
Uniprot ID Q8YVQ2 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain F  
auth_asym_id F
Residue indices (Uniprot) 1-32 (1-34)
Uniprot ID P0A3Y1 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain F-1  
auth_asym_id F
Residue indices (Uniprot) 1-32 (1-34)
Uniprot ID P0A3Y1 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id G
Residue indices (Uniprot) 1-37 (1-37)
Uniprot ID P58246 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G-1  
auth_asym_id G
Residue indices (Uniprot) 1-37 (1-37)
Uniprot ID P58246 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id H
Residue indices (Uniprot) 1-29 (1-29)
Uniprot ID P61048 →UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H-1  
auth_asym_id H
Residue indices (Uniprot) 1-29 (1-29)
Uniprot ID P61048 →UniprotKB
label_asym_ids of heme None
Available structure PDB