Danish
PDB ID:  pdb_00005mx2
  • Photosystem II depleted of the Mn4CaO5 cluster at 2.55 A resolution
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2.197 Å
  • Deposition date: 2017-01-20
Number of assemblies:  2
Assembly ID:  1  (author_defined_assembly)    
Structural data PDB
Oligomeric count 20
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AB (LFAStructure of LFALFA ), AC (LFAStructure of LFALFA ), AD (BCTStructure of BCTBCT ), AE (LFAStructure of LFALFA ), BB (FEStructure of FEFE ), BC (LFAStructure of LFALFA ), BD (PHOStructure of PHOPHO ), BE (BCRStructure of BCRBCR ), CB (CLAStructure of CLACLA ), CC (LFAStructure of LFALFA ), CD (CLAStructure of CLACLA ), CE (LFAStructure of LFALFA ), DB (CLAStructure of CLACLA ), DC (LFAStructure of LFALFA ), DD (CLAStructure of CLACLA ), EB (CLAStructure of CLACLA ), EC (LMGStructure of LMGLMG ), ED (BCRStructure of BCRBCR ), FB (CLAStructure of CLACLA ), FC (CLAStructure of CLACLA ), FD (PL9Structure of PL9PL9 ), GB (CLAStructure of CLACLA ), GC (CLAStructure of CLACLA ), GD (LHGStructure of LHGLHG ), HB (CLAStructure of CLACLA ), HC (CLAStructure of CLACLA ), HD (LHGStructure of LHGLHG ), IB (CLAStructure of CLACLA ), IC (CLAStructure of CLACLA ), ID (LHGStructure of LHGLHG ), JB (CLAStructure of CLACLA ), JC (CLAStructure of CLACLA ), JD (LMGStructure of LMGLMG ), KB (CLAStructure of CLACLA ), KC (CLAStructure of CLACLA ), KD (LFAStructure of LFALFA ), LB (CLAStructure of CLACLA ), LC (CLAStructure of CLACLA ), LD (SQDStructure of SQDSQD ), MB (CLAStructure of CLACLA ), MC (CLAStructure of CLACLA ), MD (LFAStructure of LFALFA ), NB (CLAStructure of CLACLA ), NC (CLAStructure of CLACLA ), ND (LFAStructure of LFALFA ), OA (CLStructure of CLCL ), OB (CLAStructure of CLACLA ), OC (CLAStructure of CLACLA ), OD (LHGStructure of LHGLHG ), PA (CLStructure of CLCL ), PB (CLAStructure of CLACLA ), PC (CLAStructure of CLACLA ), QA (CLAStructure of CLACLA ), QB (CLAStructure of CLACLA ), QC (CLAStructure of CLACLA ), QD (CLAStructure of CLACLA ), RA (CLAStructure of CLACLA ), RB (BCRStructure of BCRBCR ), RC (CLAStructure of CLACLA ), RD (BCRStructure of BCRBCR ), SA (PHOStructure of PHOPHO ), SB (BCRStructure of BCRBCR ), SC (BCRStructure of BCRBCR ), SD (DGDStructure of DGDDGD ), TA (CLAStructure of CLACLA ), TB (BCRStructure of BCRBCR ), TC (BCRStructure of BCRBCR ), TD (LFAStructure of LFALFA ), UA (BCRStructure of BCRBCR ), UB (LMGStructure of LMGLMG ), UC (DGDStructure of DGDDGD ), UD (LFAStructure of LFALFA ), VA (PL9Structure of PL9PL9 ), VB (LFAStructure of LFALFA ), VC (DGDStructure of DGDDGD ), VD (BCRStructure of BCRBCR ), WA (SQDStructure of SQDSQD ), WB (LMGStructure of LMGLMG ), WC (DGDStructure of DGDDGD ), WD (BCRStructure of BCRBCR ), XA (LFAStructure of LFALFA ), XB (LFAStructure of LFALFA ), XC (LMGStructure of LMGLMG ), XD (SQDStructure of SQDSQD ), YA (SQDStructure of SQDSQD ), YB (LFAStructure of LFALFA ), YC (LFAStructure of LFALFA ), YD (LHGStructure of LHGLHG ), ZA (CLAStructure of CLACLA ), ZB (LFAStructure of LFALFA ), ZC (LMGStructure of LMGLMG ), ZD (LFAStructure of LFALFA )
Each chain information

Showing all 20 chains (3 with heme). Show only chains with heme

Chain A  
auth_asym_id A
Residue indices (Uniprot) 12-344 (1-344)
Uniprot ID P0A444 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain B  
auth_asym_id B
Residue indices (Uniprot) 2-506 (1-510)
Uniprot ID Q8DIQ1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain C  
auth_asym_id C
Residue indices (Uniprot) 27-473 (1-461)
Uniprot ID Q8DIF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id D
Residue indices (Uniprot) 13-352 (1-352)
Uniprot ID Q8CM25 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 3-83 (1-84)
Uniprot ID Q8DIP0 ￫UniprotKB
label_asym_ids of heme PD
Available structure PDB
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 13-45 (1-45)
Uniprot ID Q8DIN9 ￫UniprotKB
label_asym_ids of heme PD
Available structure PDB
Chain G  
auth_asym_id H
Residue indices (Uniprot) 2-63 (1-66)
Uniprot ID Q8DJ43 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id I
Residue indices (Uniprot) 1-33 (1-38)
Uniprot ID Q8DJZ6 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id J
Residue indices (Uniprot) 8-40 (1-40)
Uniprot ID P59087 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id K
Residue indices (Uniprot) 11-45 (1-46)
Uniprot ID Q9F1K9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id L
Residue indices (Uniprot) 2-37 (1-37)
Uniprot ID Q8DIN8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain KA  
auth_asym_id R
Residue indices (Uniprot) 2-36 (1-41)
Uniprot ID Q8DKM3 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id M
Residue indices (Uniprot) 1-32 (1-36)
Uniprot ID Q8DHA7 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain M  
auth_asym_id O
Residue indices (Uniprot) 4-245 (1-272)
Uniprot ID P0A431 ￫UniprotKB
S-S bonds 19:44
label_asym_ids of heme None
Available structure PDB
Chain N  
auth_asym_id T
Residue indices (Uniprot) 1-28 (1-32)
Uniprot ID Q8DIQ0 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain O  
auth_asym_id U
Residue indices (Uniprot) 9-104 (1-134)
Uniprot ID Q9F1L5 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain P heme  
auth_asym_id V
Residue indices (Uniprot) 1-137 (1-163)
Uniprot ID P0A386 ￫UniprotKB
label_asym_ids of heme DE
Available structure PDB
Chain Q  
auth_asym_id Y
Residue indices (Uniprot) 26-46 (1-46)
Uniprot ID Q8DJI1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain R  
auth_asym_id X
Residue indices (Uniprot) 2-38 (1-41)
Uniprot ID Q9F1R6 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id Z
Residue indices (Uniprot) 1-61 (1-62)
Uniprot ID Q8DHJ2 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Assembly ID:  2  (author_defined_assembly)    
Structural data PDB
Oligomeric count 20
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AF (CLAStructure of CLACLA ), AG (CLAStructure of CLACLA ), AH (LHGStructure of LHGLHG ), BF (CLAStructure of CLACLA ), BG (CLAStructure of CLACLA ), BH (LFAStructure of LFALFA ), CF (CLAStructure of CLACLA ), CG (CLAStructure of CLACLA ), CH (LFAStructure of LFALFA ), DF (CLAStructure of CLACLA ), DG (CLAStructure of CLACLA ), DH (LFAStructure of LFALFA ), EE (FEStructure of FEFE ), EF (CLAStructure of CLACLA ), EG (CLAStructure of CLACLA ), EH (LHGStructure of LHGLHG ), FE (CLStructure of CLCL ), FF (CLAStructure of CLACLA ), FG (CLAStructure of CLACLA ), GE (CLStructure of CLCL ), GF (CLAStructure of CLACLA ), GG (CLAStructure of CLACLA ), GH (LMGStructure of LMGLMG ), HE (CLAStructure of CLACLA ), HF (CLAStructure of CLACLA ), HG (CLAStructure of CLACLA ), HH (SQDStructure of SQDSQD ), IE (CLAStructure of CLACLA ), IF (CLAStructure of CLACLA ), IG (CLAStructure of CLACLA ), IH (BCRStructure of BCRBCR ), JE (PHOStructure of PHOPHO ), JF (CLAStructure of CLACLA ), JG (CLAStructure of CLACLA ), JH (DGDStructure of DGDDGD ), KE (CLAStructure of CLACLA ), KF (BCRStructure of BCRBCR ), KG (BCRStructure of BCRBCR ), KH (LFAStructure of LFALFA ), LE (BCRStructure of BCRBCR ), LF (BCRStructure of BCRBCR ), LG (DGDStructure of DGDDGD ), LH (LFAStructure of LFALFA ), ME (PL9Structure of PL9PL9 ), MF (BCRStructure of BCRBCR ), MG (DGDStructure of DGDDGD ), MH (LFAStructure of LFALFA ), NE (SQDStructure of SQDSQD ), NF (LFAStructure of LFALFA ), NG (DGDStructure of DGDDGD ), NH (BCRStructure of BCRBCR ), OE (LFAStructure of LFALFA ), OF (LFAStructure of LFALFA ), OG (LMGStructure of LMGLMG ), OH (LHGStructure of LHGLHG ), PE (SQDStructure of SQDSQD ), PF (LMGStructure of LMGLMG ), PG (LFAStructure of LFALFA ), PH (LFAStructure of LFALFA ), QE (BCTStructure of BCTBCT ), QF (LFAStructure of LFALFA ), QG (LFAStructure of LFALFA ), QH (LFAStructure of LFALFA ), RE (PHOStructure of PHOPHO ), RF (LFAStructure of LFALFA ), RG (LMGStructure of LMGLMG ), RH (LMGStructure of LMGLMG ), SE (SQDStructure of SQDSQD ), SF (LFAStructure of LFALFA ), SG (BCRStructure of BCRBCR ), SH (LFAStructure of LFALFA ), TE (LFAStructure of LFALFA ), TF (LHGStructure of LHGLHG ), TG (BCRStructure of BCRBCR ), TH (BCRStructure of BCRBCR ), UE (CLAStructure of CLACLA ), UF (LFAStructure of LFALFA ), UG (CLAStructure of CLACLA ), VE (CLAStructure of CLACLA ), VF (LFAStructure of LFALFA ), VG (CLAStructure of CLACLA ), WE (CLAStructure of CLACLA ), WF (LMGStructure of LMGLMG ), WG (CLAStructure of CLACLA ), XE (CLAStructure of CLACLA ), XF (CLAStructure of CLACLA ), XG (BCRStructure of BCRBCR ), YE (CLAStructure of CLACLA ), YF (CLAStructure of CLACLA ), YG (PL9Structure of PL9PL9 ), ZE (CLAStructure of CLACLA ), ZF (CLAStructure of CLACLA ), ZG (LHGStructure of LHGLHG )
Each chain information

Showing all 20 chains (3 with heme). Show only chains with heme

Chain AA  
auth_asym_id i
Residue indices (Uniprot) 1-33 (1-38)
Uniprot ID Q8DJZ6 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BA  
auth_asym_id j
Residue indices (Uniprot) 8-40 (1-40)
Uniprot ID P59087 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain CA  
auth_asym_id k
Residue indices (Uniprot) 11-46 (1-46)
Uniprot ID Q9F1K9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain DA  
auth_asym_id l
Residue indices (Uniprot) 2-37 (1-37)
Uniprot ID Q8DIN8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain EA  
auth_asym_id m
Residue indices (Uniprot) 1-32 (1-36)
Uniprot ID Q8DHA7 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain FA  
auth_asym_id o
Residue indices (Uniprot) 5-245 (1-272)
Uniprot ID P0A431 ￫UniprotKB
S-S bonds 19:44
label_asym_ids of heme None
Available structure PDB
Chain GA  
auth_asym_id t
Residue indices (Uniprot) 1-29 (1-32)
Uniprot ID Q8DIQ0 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain HA  
auth_asym_id u
Residue indices (Uniprot) 9-104 (1-134)
Uniprot ID Q9F1L5 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain IA heme  
auth_asym_id v
Residue indices (Uniprot) 1-137 (1-163)
Uniprot ID P0A386 ￫UniprotKB
label_asym_ids of heme UH
Available structure PDB
Chain JA  
auth_asym_id x
Residue indices (Uniprot) 2-39 (1-41)
Uniprot ID Q9F1R6 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain LA  
auth_asym_id r
Residue indices (Uniprot) 3-34 (1-41)
Uniprot ID Q8DKM3 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain MA  
auth_asym_id y
Residue indices (Uniprot) 24-46 (1-46)
Uniprot ID Q8DJI1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain NA  
auth_asym_id z
Residue indices (Uniprot) 1-61 (1-62)
Uniprot ID Q8DHJ2 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id a
Residue indices (Uniprot) 12-344 (1-344)
Uniprot ID P0A444 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain U  
auth_asym_id b
Residue indices (Uniprot) 2-504 (1-510)
Uniprot ID Q8DIQ1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain V  
auth_asym_id c
Residue indices (Uniprot) 26-473 (1-461)
Uniprot ID Q8DIF8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain W  
auth_asym_id d
Residue indices (Uniprot) 13-352 (1-352)
Uniprot ID Q8CM25 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain X heme  
auth_asym_id e
Residue indices (Uniprot) 5-83 (1-84)
Uniprot ID Q8DIP0 ￫UniprotKB
label_asym_ids of heme FH
Available structure PDB
Chain Y heme  
auth_asym_id f
Residue indices (Uniprot) 13-45 (1-45)
Uniprot ID Q8DIN9 ￫UniprotKB
label_asym_ids of heme FH
Available structure PDB
Chain Z  
auth_asym_id h
Residue indices (Uniprot) 2-64 (1-66)
Uniprot ID Q8DJ43 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB